From 50654efbb246509d3ad94cb130b4d6649ed8e38d Mon Sep 17 00:00:00 2001
From: AGonzalezNicolas <157027467+AGonzalezNicolas@users.noreply.github.com>
Date: Tue, 23 Jul 2024 15:12:14 +0200
Subject: [PATCH] Create CI.yml

---
 .github/workflows/CI.yml | 136 +++++++++++++++++++++++++++++++++++++++
 1 file changed, 136 insertions(+)
 create mode 100644 .github/workflows/CI.yml

diff --git a/.github/workflows/CI.yml b/.github/workflows/CI.yml
new file mode 100644
index 0000000000..e508a908a8
--- /dev/null
+++ b/.github/workflows/CI.yml
@@ -0,0 +1,136 @@
+# Controls when the action will run. Triggers the workflow on push or pull request
+# events but only for the master branch
+on:
+  push:
+    branches:  [ eclm, ubuntu2204] 
+  pull_request:
+    branches: [ eclm, ubuntu2204]
+
+# A workflow run is made up of one or more jobs that can run sequentially or in parallel
+jobs:
+  # This workflow contains a single job called "build"
+  build:
+    # The type of runner that the job will run on
+    runs-on: ubuntu-latest
+    env:
+      CC: mpicc
+      FC: mpifort
+      CXX: mpicxx
+      CPPFLAGS: "-I/usr/include -I/usr/local/include"
+      CIME_TEST_PLATFORM: ubuntu-latest
+      # Versions of all dependencies can be updated here
+      PNETCDF_VERSION: pnetcdf-1.12.3
+      NETCDF_FORTRAN_VERSION: v4.6.0
+      MCT_VERSION: MCT_2.11.0
+      PARALLELIO_VERSION: pio2_5_10
+      NETCDF_C_PATH: /usr
+      NETCDF_FORTRAN_PATH: ${HOME}/netcdf-fortran
+      PNETCDF_PATH: ${HOME}/pnetcdf
+      CIME_MODEL: cesm
+      CIME_DRIVER: mct
+
+    # Steps represent a sequence of tasks that will be executed as part of the job
+    steps:
+      # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it
+     
+      - id: load-env
+        run: |
+          sudo apt-get update
+          sudo apt-get install libxml2-utils pylint wget gfortran openmpi-bin netcdf-bin libopenmpi-dev cmake libnetcdf-dev
+
+      # - name: Set up Python ${{ matrix.python-version }}
+      #   uses: actions/setup-python@v4
+      #   with:
+      #     python-version: ${{ matrix.python-version }}
+      #     cache: 'pip'
+
+      # - name: pip install
+      #   run: pip install PyYAML
+        
+      - name: cache pnetcdf
+        id: cache-pnetcdf
+        uses: actions/cache@v3
+        with:
+          path: ~/pnetcdf
+          key: ${{ runner.os }}-${{ env.PNETCDF_VERSION}}-pnetcdf-redo
+
+      - name: pnetcdf build
+        if: steps.cache-pnetcdf.outputs.cache-hit != 'true'
+        run: |
+          wget https://parallel-netcdf.github.io/Release/${{ env.PNETCDF_VERSION }}.tar.gz
+          tar -xzvf ${{ env.PNETCDF_VERSION }}.tar.gz
+          ls -l
+          pushd ${{ env.PNETCDF_VERSION }}
+          chmod +x configure
+          bash ./configure --prefix=$HOME/pnetcdf --enable-shared --disable-cxx
+          make
+          make install
+          popd
+
+      - name: Cache netcdf-fortran
+        id: cache-netcdf-fortran
+        uses: actions/cache@v3
+        with:
+          path: ~/netcdf-fortran
+          key: ${{ runner.os }}-${{ env.NETCDF_FORTRAN_VERSION }}-netcdf-fortran-redo
+
+      - name: netcdf fortran build
+        if: steps.cache-netcdf-fortran.outputs.cache-hit != 'true'
+        run: |
+          wget https://github.com/Unidata/netcdf-fortran/archive/${{ env.NETCDF_FORTRAN_VERSION }}.tar.gz
+          tar -xzvf ${{ env.NETCDF_FORTRAN_VERSION }}.tar.gz
+          ls -l
+          pushd netcdf-fortran-*
+          chmod +x configure
+          bash ./configure --prefix=$HOME/netcdf-fortran
+          make
+          make install
+
+      - name: link netcdf-c to netcdf-fortran path
+        # link netcdf c library here to simplify build
+        run: |
+          pushd ${{ env.NETCDF_FORTRAN_PATH }}/include
+          ln -fs /usr/include/*netcdf* .
+          pushd ${{ env.NETCDF_FORTRAN_PATH }}/lib
+          clibdir=`nc-config --libdir`
+          ln -fs $clibdir/lib* .
+
+          sudo ln -s $HOME/pnetcdf/lib/pkgconfig/pnetcdf.pc /usr/lib/pkgconfig
+          sudo ln -s $HOME/netcdf-fortran/lib/pkgconfig/netcdf-fortran.pc /usr/lib/pkgconfig
+
+#      The following can be used to ssh to the testnode for debugging
+#      see https://github.com/mxschmitt/action-tmate for details
+#      - name: Setup tmate session
+#        uses: mxschmitt/action-tmate@v3
+      - uses: actions/checkout@v4
+      - name: build eCLM
+        run: |
+          # User-specific variables
+          ls -al
+          BUILD_DIR="bld"
+          INSTALL_DIR="eclm"
+
+          # Run cmake
+          cmake -S src -B "$BUILD_DIR" \
+                -DCMAKE_INSTALL_PREFIX="$INSTALL_DIR" \
+                -DCMAKE_C_COMPILER=mpicc \
+                -DCMAKE_Fortran_FLAGS="-fallow-argument-mismatch -fallow-invalid-boz" \
+                -DCMAKE_Fortran_COMPILER=mpifort
+
+          cd bld
+          make -j${nproc}
+
+          ls -al
+          ls -al eclm
+      # - name: Cache inputdata
+      #   if: ${{ ! env.ACT }}
+      #   uses: actions/cache@v3
+      #   with:
+      #     path: $HOME/cesm/inputdata
+      #     key: inputdata
+
+#     the following can be used by developers to login to the github server in case of errors
+#     see https://github.com/marketplace/actions/debugging-with-tmate for further details
+#      - name: Setup tmate session
+#        if: ${{ failure() }}
+#        uses: mxschmitt/action-tmate@v3