From 377bcc015ea216c03fbf7e7a12db46c1e8ff8887 Mon Sep 17 00:00:00 2001 From: Joshua Klein Date: Tue, 19 Mar 2024 21:37:54 -0400 Subject: [PATCH 1/3] Add term from meeting discussion --- psi-ms.obo | 12 +++++++++--- 1 file changed, 9 insertions(+), 3 deletions(-) diff --git a/psi-ms.obo b/psi-ms.obo index c548fef..6334d25 100644 --- a/psi-ms.obo +++ b/psi-ms.obo @@ -1,7 +1,7 @@ format-version: 1.2 -data-version: 4.1.142 -date: 24:01:2024 10:23 -saved-by: Eric Deutsch +data-version: 4.1.143 +date: 19:03:2024 10:23 +saved-by: Joshua Klein auto-generated-by: OBO-Edit 2.3.1 import: http://purl.obolibrary.org/obo/pato.obo import: http://purl.obolibrary.org/obo/stato.owl @@ -2893,6 +2893,12 @@ name: laser desorption ionization def: "The formation of gas-phase ions by the interaction of a pulsed laser with a solid or liquid material." [PSI:MS] is_a: MS:1000247 ! desorption ionization +[Term] +id: MS:1000394 +name: de novo search or no database used +def: "The search database does not exist as the search process used de novo sequencing to determine the identified peptide sequence." [PSI:PI] +is_a: MS:1001347 ! database file format + [Term] id: MS:1000395 name: liquid secondary ionization From d62e3746d599f0d4d05430807e2f0891d67ef61f Mon Sep 17 00:00:00 2001 From: Joshua Klein Date: Fri, 12 Apr 2024 12:00:51 -0400 Subject: [PATCH 2/3] Amend term --- psi-ms.obo | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/psi-ms.obo b/psi-ms.obo index 0f0749e..1e87172 100644 --- a/psi-ms.obo +++ b/psi-ms.obo @@ -2895,8 +2895,8 @@ is_a: MS:1000247 ! desorption ionization [Term] id: MS:1000394 -name: de novo search or no database used -def: "The search database does not exist as the search process used de novo sequencing to determine the identified peptide sequence." [PSI:PI] +name: no sequence database +def: "No reference sequence database was used in the search process to determine the identified peptide sequence, for example as with de novo sequencing." [PSI:PI] is_a: MS:1001347 ! database file format [Term] From 31209869e51b89d7fdce8e21363045f3fca49aae Mon Sep 17 00:00:00 2001 From: Joshua Klein Date: Fri, 12 Apr 2024 12:01:12 -0400 Subject: [PATCH 3/3] Update date --- psi-ms.obo | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/psi-ms.obo b/psi-ms.obo index 1e87172..5f2b55d 100644 --- a/psi-ms.obo +++ b/psi-ms.obo @@ -1,6 +1,6 @@ format-version: 1.2 -data-version: 4.1.146 -date: 05:04:2024 13:22 +data-version: 4.1.147 +date: 12:04:2024 13:22 saved-by: Joshua Klein auto-generated-by: OBO-Edit 2.3.1 import: http://purl.obolibrary.org/obo/pato.obo