diff --git a/psi-ms.obo b/psi-ms.obo index 211ecf7..c8a955c 100644 --- a/psi-ms.obo +++ b/psi-ms.obo @@ -1,8 +1,7 @@ format-version: 1.2 -data-version: 4.1.184 -date: 01:11:2024 10:15 -saved-by: Yasset Perez-Riverol -auto-generated-by: OBO-Edit 2.3.1 +data-version: 4.1.185 +date: 31:10:2024 10:20 +saved-by: Nithu Sara John default-namespace: MS namespace-id-rule: * MS:$sequence(7,0,9999999)$ namespace-id-rule: * PEFF:$sequence(7,0,9999999)$ @@ -24,6 +23,7 @@ remark: creator: Wout Bittremieux uantwerpen.be> remark: creator: Nils Hoffmann < nils.hoffmann <-at-> cebitec.uni-bielefeld.de> remark: creator: Julian Uszkoreit ruhr-uni-bochum.de> remark: creator: Mathias Walzer ebi.ac.uk> +remark: creator: Nithu Sara John ebi.ac.uk> remark: publisher: HUPO Proteomics Standards Initiative Mass Spectrometry Standards Working Group and HUPO Proteomics Standards Initiative Proteomics Informatics Working Group remark: When appropriate the definition and synonyms of a term are reported exactly as in the chapter 12 of IUPAC orange book. See http://www.iupac.org/projects/2003/2003-056-2-500.html and http://mass-spec.lsu.edu/msterms/index.php/Main_Page remark: For any queries contact psidev-ms-vocab@lists.sourceforge.net @@ -22674,6 +22674,56 @@ def: "Cloud-based pipeline for quantitative proteomics that enables the reanalys is_a: MS:1001456 ! analysis software is_a: MS:1001139 ! quantitation software name +[Term] +id: MS:1003426 +name: xQuest/xProphet +def: "A software to identify cross-linked peptides from LC-MS/MS spectra." [PMID:18327264] +is_a: MS:1001139 ! quantitation software name +is_a: MS:1001456 ! analysis software + +[Term] +id: MS:1003427 +name: PeakView +def: "A software for spectral analysis and data interrogation in qualitative review of LC-MS and MS/MS data." [PMID:32275110] +is_a: MS:1001139 ! quantitation software name +is_a: MS:1001456 ! analysis software + +[Term] +id: MS:1003428 +name: Perseus +def: "A software for interpreting protein quantification, interaction and post-translational modification data." [PMID:27348712] +is_a: MS:1001139 ! quantitation software name +is_a: MS:1001456 ! analysis software + +[Term] +id: MS:1003429 +name: FragPipe +def: "A computational platform for analyzing mass spectrometry-based proteomics data." [PMID:37878603] +is_a: MS:1001139 ! quantitation software name +is_a: MS:1001456 ! analysis software + +[Term] +id: MS:1003430 +name: OpenMS +def: "A software for LC-MS data management and analysis." [PMID:38366242] +is_a: MS:1001139 ! quantitation software name +is_a: MS:1001456 ! analysis software + +[Term] +id: MS:1003431 +name: pLink +def: "A tool for the analysis of chemically cross-linked proteins using mass spectrometry." [PMID:22772728] +is_a: MS:1001139 ! quantitation software name +is_a: MS:1001456 ! analysis software + +[Term] +id: MS:1003432 +name: pLink2 +def: "Upgraded version of pLink tool, provides a graphical user interface and faster with newly designed index structure." [PMID:31363125] +is_a: MS:1003431 ! pLink +is_a: MS:1001139 ! quantitation software name +is_a: MS:1001456 ! analysis software + [Term] id: MS:4000000 name: PSI-MS CV Quality Control Vocabulary