diff --git a/iss/app.py b/iss/app.py index 12656a0..bbcdbdd 100644 --- a/iss/app.py +++ b/iss/app.py @@ -64,7 +64,7 @@ def generate_reads(args): if readcount_dic is not None: n_reads = sum(readcount_dic.values()) logger.info("Generating %s reads" % n_reads) - elif not (args.coverage or args.coverage_file): + else: n_reads = util.convert_n_reads(args.n_reads) logger.info("Generating %s reads" % n_reads) diff --git a/iss/generator.py b/iss/generator.py index f948d7b..70033f5 100644 --- a/iss/generator.py +++ b/iss/generator.py @@ -560,7 +560,6 @@ def load_readcount_or_abundance( abundance_dic = abundance.parse_abundance_file(coverage_file) elif coverage in abundance_dispatch: # todo coverage distribution with --draft - logger.warning("--coverage is an experimental feature") logger.info("Using %s coverage distribution" % coverage) if draft: abundance_dic = abundance.draft(