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tasks.py
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tasks.py
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# -*- coding: utf-8 -*-
from __future__ import print_function
from invoke import Collection, task
from util import join,joinline,joinlineif,clean,escape,escape_path,code2name
import csv
import codecs
import magic
import glob
import MARC21relaxed
import pyxb
import dublincore
import os
import fnmatch
from os.path import exists
from osgeo import gdal, osr
from pyproj import Proj, transform
import xml.sax.saxutils
import csw
import aseq
import template
import geocoder
import regions
import xml.sax.saxutils
import time
from datetime import date
import requests
@task()
def index(ctx):
"""
update index
"""
ctx.run('python /data/code/woldan/manage.py rebuild_index -v 3 --noinput')
@task(help={'overwrite':"overwrite existing geotiff"})
def geotiff(ctx,_overwrite=False):
"""
update geotiff
"""
cleanup(ctx)
ctx.run('mkdir -p {path}'.format(path=ctx.gcp_dir))
ctx.run('mkdir -p {path}'.format(path=ctx.vips_dir))
#ctx.run('mkdir -p {path}'.format(path=ctx.warp_dir))
ctx.run('mkdir -p {path}'.format(path=ctx.wld_dir))
ctx.run('mkdir -p {path}'.format(path=ctx.output_dir))
for root, dir, files in os.walk(ctx.input_dir):
for tif in fnmatch.filter(files, "*.tif"):
img = os.path.join(root,tif).replace(' ','\ ').replace('&','\&').replace("'","\'")
filename, ext = os.path.splitext(tif)
points_in = os.path.join(root,filename+'.tif.points')
tiff_in = os.path.join(root,tif).replace("'","\\'")
tiff_gcp = os.path.join(ctx.gcp_dir,clean(tif))
tiff_warp = os.path.join(ctx.warp_dir,clean(tif).lower())
tiff_vips = os.path.join(ctx.vips_dir,clean(tif).lower())
tiff_wld = os.path.join(ctx.wld_dir,clean(tif))
tiff_final = os.path.join(ctx.output_dir,clean(tif).lower())
wld_gcp = os.path.join(ctx.gcp_dir,clean(filename)+'.wld')
gtxt_out = os.path.join(ctx.output_dir,clean(filename).lower()+'.geo')
#print ("Processing",img)
if exists(tiff_final):
if _overwrite:
ctx.run('rm -rf {file}'.format(file=tiff_final))
else:
print ("Skipping",img)
continue
if not exists(points_in):
print("Missing",points_in," for",tiff_in)
if not exists(tiff_gcp):
ctx.run ('cp -v {tiff_in} {tiff_gcp}'.format(tiff_in=escape_path(tiff_in),tiff_gcp=escape_path(tiff_gcp)))
if exists(tiff_gcp):
if exists(wld_gcp):
ctx.run('rm -v {wld}'.format(wld=wld_gcp))
if exists(points_in):
print ("Reading",points_in)
with open(points_in) as csvfile:
try:
reader = csv.DictReader(csvfile)
gcp=""
for row in reader:
gcp+="-gcp {pixelX} {pixelY} {mapX} {mapY} ".format(pixelX=row['pixelX'],pixelY=abs(float(row['pixelY'])),mapX=row['mapX'],mapY=row['mapY'])
ctx.run('gdal_edit.py -unsetgt -a_srs EPSG:3857 -mo NODATA_VALUES="255 255 255" {gcp} {tiff}'.format(gcp=gcp,tiff=tiff_gcp))
except:
print("Failed to read point file")
continue
try:
dataset = gdal.Open(tiff_gcp)
gcps = dataset.GetGCPs()
geotransform = gdal.GCPsToGeoTransform(gcps)
ulx, xres, xskew, uly, yskew, yres = gdal.GCPsToGeoTransform( gcps)
lrx = ulx + (dataset.RasterXSize * xres)
lry = uly + (dataset.RasterYSize * yres)
proj3857 = Proj(init='epsg:3857')
proj4326 = Proj(init='epsg:4326')
west,north = transform(proj3857,proj4326,ulx,uly)
east,south = transform(proj3857,proj4326,lrx,lry)
except:
print("Failed to read gcp points")
continue
else:
ctx.run('gdal_edit.py -a_srs EPSG:3857 -a_nodata 255 -mo NODATA_VALUES="255 255 255" -a_ullr 0 -20000000 20026376 -20026376.39 {tiff}'.format(tiff=tiff_gcp))
ctx.run('gcps2wld.py {tiff} > {wld_out}'.format(tiff=tiff_gcp,wld_out=wld_gcp))
ctx.run('gdal_translate -a_srs EPSG:3857 -mo NODATA_VALUES="255 255 255" {tiff_in} {tiff_out}'.format(tiff_in=tiff_gcp,tiff_out=tiff_wld))
if exists(gtxt_out):
ctx.run('rm -rf {file}'.format(file=gtxt_out))
ctx.run("listgeo {tiff_in} > {gtxt_out}".format(tiff_in=escape_path(tiff_wld),gtxt_out=escape_path(gtxt_out)))
os.chmod(gtxt_out,ctx.permission_file)
ctx.run('chmod {permission} {file}'.format(permission=ctx.permission_file,file=gtxt_out))
if not exists(tiff_final):
ctx.run("vips --vips-concurrency=16 im_vips2tiff {tiff_in} {tiff_out}:deflate,tile:256x256,pyramid".format(tiff_in=escape_path(tiff_gcp),tiff_out=escape_path(tiff_final)))
ctx.run("applygeo {gtxt_in} {tiff_out}".format(gtxt_in=escape_path(gtxt_out),tiff_out=escape_path(tiff_final)))
ctx.run('gdal_edit.py -mo NODATA_VALUES="255 255 255" {tiff_out}'.format(tiff_out=tiff_final))
ctx.run('chmod {permission} {file}'.format(permission=ctx.permission_file,file=tiff_final))
cleanup(ctx)
@task()
def sitemap(ctx):
"""
update sitemap
"""
w3c_date=date.today().strftime("%Y-%m-%d")
with open(ctx.geonode_dir+'/geonode/static/robots.txt', 'w')as robots_file:
robots_file.write(template.ROBOTS.format(url=ctx.url_site))
with open(ctx.geonode_dir+'/geonode/static/sitemap.xml', 'w')as sitemap_file:
sitemap_file.write(template.HEADER.format(url_site=ctx.url_site,date=w3c_date))
print ("Importing Metadata")
records=aseq.load(ctx)
for root, dir, files in os.walk(ctx.input_dir):
for tif in fnmatch.filter(files, "*.tif"):
img = os.path.join(root,tif).replace(' ','\ ').replace('&','\&').replace("'","\'")
filename, ext = os.path.splitext(tif)
layer=clean(filename).lower()
title=filename.replace('_',' ').replace('[','').replace(']','')
title_short=' '.join(title.split(' ')[1:])
print ("Adding",layer)
fs=filename.split('_')
try:
ac,author,imgname,year = fs[0],fs[1],' '.join(fs[2:-1]).strip(),fs[-1]
name=' '.join(fs[1:])
ac = ac.strip()
#name = ' '.join([year,imgname,author]).strip()
name_url = clean(escape(name))
except IndexError:
print("Can't parse", filename)
continue
a331_a=aseq.get_key(records,ac,"331"," "," ","a")
a335_a=aseq.get_key(records,ac,"335"," "," ","a")
title=a331_a.replace('[','').replace(']','')
titleValue=join(a331_a,a335_a,' : ').replace('[','').replace(']','')
sitemap_file.write(template.MAP.format(url_site=ctx.url_site,url_iiif=ctx.url_iiif,layer=layer,title=escape(title_short),caption=escape(titleValue),date=w3c_date,id=ac))
sitemap_file.write(template.FOOTER)
@task()
def cache(ctx):
"""
update geoserver cache
"""
for root, dir, files in os.walk(ctx.input_dir):
for tif in fnmatch.filter(files, "*.tif"):
img = os.path.join(root,tif).replace(' ','\ ').replace('&','\&').replace("'","\'")
filename, ext = os.path.splitext(tif)
layer=clean(filename).lower()
url_jpeg_standard = "{url_iiif}/?IIIF={layer}.tif/full/,1500/0/default.jpg".format(url_iiif=ctx.url_iiif,layer=layer)
url_jpeg_large = "{url_iiif}/?IIIF={layer}.tif/full/,5000/0/default.jpg".format(url_iiif=ctx.url_iiif,layer=layer)
url_geotiff_normal = "{url_iiif}/image/{layer}.tif".format(url_iiif=ctx.url_iiif,layer=layer)
url_geotiff_transformed="{url_site}/geoserver/wcs?format=image%2Ftiff&request=GetCoverage&version=2.0.1&service=WCS&coverageid=geonode%3A{layer}".format(url_site=ctx.url_site,layer=layer)
url_googleearth="{url_site}/geoserver/wms/kml?layers=geonode%3A{layer}".format(url_site=ctx.url_site,layer=layer)
for url in (url_jpeg_standard,url_jpeg_large,url_geotiff_normal,url_geotiff_transformed,url_googleearth):
r = requests.get(url)
if r.status_code==200:
print ("SUCCESS",url)
else:
print ("ERROR",url)
@task(help={'overwrite':"Overwrite existing metadata"})
def metadata(ctx,_overwrite=False):
"""
update all metadata xml files
"""
print ("Importing Categories")
category_dict={}
with open(ctx.category, 'r')as category_file:
category_csv = csv.DictReader(category_file,dialect='excel',delimiter=';')
for row in category_csv:
#print(row)
category_dict[row['filename']]={
'category1':row['category1'].decode('iso-8859-1').encode('utf8'),
'category2':row['category2'].decode('iso-8859-1').encode('utf8'),
'category3':row['category3'].decode('iso-8859-1').encode('utf8'),
'category4':row['category4'].decode('iso-8859-1').encode('utf8'),
'category5':row['category5'].decode('iso-8859-1').encode('utf8'),
'blatt_titel':row['blatt_titel'].decode('iso-8859-1').encode('utf8'),
}
for i in range(1,250):
try:
blatt=row['titel_blatt%02i'%i].decode('iso-8859-1').encode('utf8')
if blatt:
# print(row['\xef\xbb\xbffilename'],blatt)
category_dict[row['filename']].update({'titel_blatt%02i'%i:blatt})
except KeyError:
pass
print ("Importing Metadata")
records=aseq.load(ctx)
#print(records)
#print (records['AC04408812']['677'])
#csv_abstract=open("out/woldan_abstract.csv","w")
#csv_abstract.write("title,abstract\n")
#ctx.run("mkdir -p %s"%ctx.log_dir)
#csv_import=open("%s/woldan_import.csv"%ctx.log_dir,"w")
#csv_import.write("filename,denominator,geo,abstract,biblio,category1,category2,category3,category4,category5\n")
#dc_import=open("%s/woldan_import_dc.xml"%ctx.log_dir,"w")
#dc_import.write(dublincore.HEADER)
#dc=""
countries=regions.country2kontinent()
for root, dir, files in os.walk(ctx.input_dir):
for tif in fnmatch.filter(files, "*.tif"):
img = os.path.join(root,tif).replace(' ','\ ').replace('&','\&').replace("'","\'")
filename, ext = os.path.splitext(tif)
tiff_in = os.path.join(root,tif)
points_in = escape_path(os.path.join(root,filename+'.tif.points'))
abstract_in= os.path.join(root,filename+'_Abstract.txt')
biblio_in= os.path.join(root,filename+'_Biblio.txt')
tiff_gcp = os.path.join(ctx.gcp_dir,clean(tif))
tiff_warp = os.path.join(ctx.warp_dir,clean(tif).lower())
tiff_vips = os.path.join(ctx.vips_dir,clean(tif).lower())
tiff_wld = os.path.join(ctx.wld_dir,clean(tif))
tiff_final = os.path.join(ctx.output_dir,clean(tif).lower())
wld_gcp = os.path.join(ctx.gcp_dir,clean(filename)+'.wld')
gtxt_out = os.path.join(ctx.output_dir,clean(filename).lower()+'.geo')
xml_out = os.path.join(ctx.output_dir,clean(filename).lower()+'.xml')
if exists(tiff_final):
try:
dataset = gdal.Open(tiff_final)
cols = dataset.RasterXSize
rows = dataset.RasterYSize
bands = dataset.RasterCount
except AttributeError:
continue
ulx, xres, xskew, uly, yskew, yres = dataset.GetGeoTransform()
lrx = ulx + (dataset.RasterXSize * xres)
lry = uly + (dataset.RasterYSize * yres)
denominator=int(round(xres*dataset.RasterXSize))
if denominator > 20000000:
denominator = 50000000
else:
ulx=0
uly=0
lry=0
lrx=0
inProj = Proj(init='epsg:3857')
outProj = Proj(init='epsg:4326')
west,north = transform(inProj,outProj,ulx,uly)
east,south = transform(inProj,outProj,lrx,lry)
fs=filename.split('_')
try:
ac,author,imgname,year = fs[0],fs[1],' '.join(fs[2:-1]).strip(),fs[-1]
name=' '.join(fs[1:])
ac = ac.strip()
#name = ' '.join([year,imgname,author]).strip()
name_url = clean(escape(name))
except IndexError:
print("Can't parse", filename)
continue
if exists(xml_out) and not _overwrite:
print ("Passing",xml_out)
else:
if exists(xml_out) and _overwrite:
ctx.run('rm -rf {file}'.format(file=xml_out))
print ("Writing",xml_out)
abstract=""
supplemental=""
a010_a=aseq.get_key(records,ac,"010"," "," ","a") # AC Nummer -> 331_a
parent_a331_a=aseq.get_key(records,a010_a,"331"," "," ","a")
a451_a=aseq.get_key(records,ac,"451"," "," ","a")
a453ma=aseq.get_key(records,ac,"453","m"," ","a")
a453ra=aseq.get_key(records,ac,"453","r"," ","a")
parent_a453ma=aseq.get_key(records,a453ma,"331"," "," ","a")
parent_a453ra=aseq.get_key(records,a453ra,"331"," "," ","a")
a590_a=aseq.get_key(records,ac,"590"," "," ","a")
a599_a=aseq.get_key(records,ac,"599"," "," ","a")
parent_a599_a=aseq.get_key(records,a599_a,"331"," "," ","a")
a034_b=aseq.get_key(records,ac,"034"," "," ","b")
partOf=""
if parent_a331_a:
partOf+=parent_a331_a +'\n'
if parent_a453ma:
partOf+=parent_a453ma +'\n'
if parent_a453ra:
partOf+=parent_a453ra +'\n'
if parent_a599_a:
partOf+=parent_a599_a +'\n'
try:
if (category_dict[filename]['blatt_titel']):
partOf=category_dict[filename]['blatt_titel']
except KeyError:
pass
#print ("No partOf")
supplemental+=joinlineif("**Gesamttitel:** \n",partOf)
a331_a=aseq.get_key(records,ac,"331"," "," ","a")
a335_a=aseq.get_key(records,ac,"335"," "," ","a")
title=a331_a.replace('[','').replace(']','')
titleValue=join(a331_a,a335_a,' : ').replace('[','').replace(']','')
supplemental+=joinlineif("**Titel:** \n",titleValue)
print("titleValue",titleValue)
print("partOf",partOf)
a089_p=aseq.get_key(records,ac,"089"," "," ","p")
a089_n=aseq.get_key(records,ac,"089"," "," ","n")
a455_a=aseq.get_key(records,ac,"455"," "," ","a")
a596_a=aseq.get_key(records,ac,"596"," "," ","a")
partNumber=joinline(a089_p,a089_n,' / ')
partNumber=joinline(a455_a)
partNumber=joinline(a596_a)
supplemental+=joinlineif("**Zählung:** \n",partNumber)
a341_a=aseq.get_key(records,ac,"341"," "," ","a")
a343_a=aseq.get_key(records,ac,"343"," "," ","a")
a345_a=aseq.get_key(records,ac,"345"," "," ","a")
a347_a=aseq.get_key(records,ac,"347"," "," ","a")
a370aa=aseq.get_key(records,ac,"370","a"," ","a")
titleVariant=joinline(a341_a,a343_a,j=' : ')
titleVariant+=joinline(a345_a,a347_a,j=' : ')
titleVariant+=joinline(a370aa)
supplemental+=joinlineif("**Weitere Titel:** \n",titleVariant)
a100_p=aseq.get_key(records,ac,"100"," "," ","p")
a100_d=aseq.get_key(records,ac,"100"," "," ","d")
a100_4=code2name(aseq.get_key(records,ac,"100"," "," ","4"))
a104ap=aseq.get_key(records,ac,"104","a"," ","p")
a104ad=aseq.get_key(records,ac,"104","a"," ","d")
a104a4=code2name(aseq.get_key(records,ac,"104","a"," ","4"))
a108ap=aseq.get_key(records,ac,"108"," ","a","p")
a108ad=aseq.get_key(records,ac,"108"," ","a","d")
a108a4=code2name(aseq.get_key(records,ac,"108","a"," ","4"))
a112ap=aseq.get_key(records,ac,"112","a"," ","p")
a112a4=code2name(aseq.get_key(records,ac,"112","a"," ","4"))
a100bp=aseq.get_key(records,ac,"100","b"," ","p")
a100bd=aseq.get_key(records,ac,"100","b"," ","d")
a100b4=code2name(aseq.get_key(records,ac,"100","b"," ","4"))
a104bp=aseq.get_key(records,ac,"104","b"," ","p")
a104bd=aseq.get_key(records,ac,"104","b"," ","d")
a104b4=code2name(aseq.get_key(records,ac,"104","b"," ","4"))
a108bp=aseq.get_key(records,ac,"108","b"," ","p")
a108bd=aseq.get_key(records,ac,"108","b"," ","d")
a108b4=code2name(aseq.get_key(records,ac,"108","b"," ","4"))
a112ad=aseq.get_key(records,ac,"112","a"," ","d")
a112bp=aseq.get_key(records,ac,"112","b"," ","p")
a112bd=aseq.get_key(records,ac,"112","b"," ","d")
a112b4=code2name(aseq.get_key(records,ac,"112","b"," ","4"))
a200_k=aseq.get_key(records,ac,"200"," "," ","k")
a200bh=aseq.get_key(records,ac,"200","b"," ","h")
a200_h=aseq.get_key(records,ac,"200"," "," ","h")
a200_4=code2name(aseq.get_key(records,ac,"200"," "," ","4"))
a204ak=aseq.get_key(records,ac,"204","a"," ","k")
a204ah=aseq.get_key(records,ac,"204","a"," ","h")
a204a4=code2name(aseq.get_key(records,ac,"204","a"," ","4"))
a208ak=aseq.get_key(records,ac,"208","a"," ","k")
a208ah=aseq.get_key(records,ac,"208","a"," ","h")
a208a4=code2name(aseq.get_key(records,ac,"208","a"," ","4"))
a200bk=aseq.get_key(records,ac,"200","b"," ","k")
a200b4=code2name(aseq.get_key(records,ac,"200","b"," ","4"))
a204bk=aseq.get_key(records,ac,"204","b"," ","k")
a204b4=code2name(aseq.get_key(records,ac,"204","b"," ","4"))
a208bk=aseq.get_key(records,ac,"208","b"," ","k")
a208bh=aseq.get_key(records,ac,"208","b"," ","h")
a208b4=code2name(aseq.get_key(records,ac,"208","b"," ","4"))
a677_p=aseq.get_key(records,ac,"677"," "," ","p")
a677_d=aseq.get_key(records,ac,"677"," "," ","d")
a677_4=code2name(aseq.get_key(records,ac,"677"," "," ","4"))
a064aa=aseq.get_key(records,ac,"064","a"," ","a")
a439_d=aseq.get_key(records,ac,"439"," "," ","d")
a204bk=aseq.get_key(records,ac,"204","b"," ","k")
a204bh=aseq.get_key(records,ac,"204","b"," ","h")
a425a_=aseq.get_key(records,ac,"425","a"," ","")
a001_a=aseq.get_key(records,ac,"001"," "," ","a")
a034_d=aseq.get_key(records,ac,"034"," "," ","d")
a034_g=aseq.get_key(records,ac,"034"," "," ","g")
a034_e=aseq.get_key(records,ac,"034"," "," ","e")
a034_f=aseq.get_key(records,ac,"034"," "," ","f")
a037ba=aseq.get_key(records,ac,"037","b"," ","a")
relator=joinline(a100_p,a100_d,a100_4,'; ')
relator+=joinline(a104ap,a104ad,a104a4,'; ')
relator+=joinline(a108ap,a108ad,a108a4,'; ')
relator+=joinline(a112ap,a112ad,a112a4,'; ')
relator+=joinline(a100bp,a100bd,a100b4,'; ')
relator+=joinline(a104bp,a104bd,a104b4,'; ')
relator+=joinline(a108bp,a108bd,a108b4,'; ')
relator+=joinline(a112bp,a112bd,a112b4,'; ')
relator+=joinline(a200_k,a200_h,a200_4,'; ')
relator+=joinline(a204ak,a204ah,a204a4,'; ')
relator+=joinline(a208ak,a208ah,a208b4,'; ')
relator+=joinline(a200bk,a200bh,a200b4,'; ')
relator+=joinline(a208bk,a208bh,a208b4,'; ')
a677_ps=a677_p.split('\n\n')
a677_ds=a677_d.split('\n\n')
a677_4s=a677_4.split('\n\n')
#print (a677_d)
#print(len(a677_ps),a677_ps)
#print(len(a677_ds),a677_ds)
#print(len(a677_4s),a677_4s)
for i in range(0,len(a677_ps)):
try:
ap= a677_ps[i]
except IndexError:
ap=''
try:
a4= a677_4s[i]
except IndexError:
a4=''
try:
ad= a677_ds[i].replace('""','')
except IndexError:
ad=''
if ap:
pers=ap+'; '+ad+' ['+a4+']\n\n'
relator+=pers.replace(' ',' ')
#relator+=joinline(a677_p,a677_d,a677_4,'; ')
person=joinline(a100_p,a100_d,a100_4,'; ')
person+=joinline(a200_k,a200_h,a200_4,'; ')
supplemental+=joinlineif("**Personen/Institution:** \n",relator.replace('\n\n',' \n'))
a359_a=aseq.get_key(records,ac,"359"," "," ","a")
responsibilityStatement=joinline(a359_a)
supplemental+=joinlineif("**Verantwortlichkeitsangabe:** \n",responsibilityStatement)
a403_a=aseq.get_key(records,ac,"403"," "," ","a")
edition=joinline(a403_a).replace('_',' ').replace('[','').replace(']','')
supplemental+=joinlineif("**Ausgabe:** \n",edition)
a419_a=aseq.get_key(records,ac,"419"," "," ","a")
providerPlace=joinline(a419_a)
supplemental+=joinlineif("**Ort:** \n",providerPlace).replace('[','').replace(']','')
a419_b=aseq.get_key(records,ac,"419"," "," ","b")
providerName=joinline(a419_b).replace('_',' ').replace('[','').replace(']','')
supplemental+=joinlineif("**Verlag/Druck:** \n",providerName)
a419_c=aseq.get_key(records,ac,"419"," "," ","c")
providerDate=joinline(a419_c).replace('_',' ').replace('[','').replace(']','')
supplemental+=joinlineif("**Datierung:** \n",providerDate)
a407_a=aseq.get_key(records,ac,"407"," "," ","a")
cartographicScale=joinline(a407_a)
supplemental+=joinlineif("**Maßstab:** \n",cartographicScale)
a433_a=aseq.get_key(records,ac,"433"," "," ","a")
a437_a=aseq.get_key(records,ac,"437"," "," ","a")
extend=join(a433_a,a437_a,' + ')
supplemental+=joinlineif("**Umfang:** \n",extend)
a435_a=aseq.get_key(records,ac,"435"," "," ","a")
dimension=join(a435_a)
supplemental+=joinlineif("**Format:** \n",dimension)
a439_a=aseq.get_key(records,ac,"439"," "," ","d")
baseMaterial=join(a439_a)
supplemental+=joinlineif("**Reproduktionsverfahren:** \n",baseMaterial)
#
# Bis Doppelpunkt fett und doppelter Zeilenumbruch
#
a501_a=aseq.get_key(records,ac,"501"," "," ","a")
note=joinline(a501_a)
note_mk=""
for line in note.split('\n'):
ls= line.split(':')
if len(ls)==2:
note_mk+='\n**'+ls[0].strip()+':** \n'+ls[1].strip()+'\n'
#supplemental+=joinlineif("**Anmerkungen:** \n",note_mk)
supplemental+=joinlineif("",note_mk)
blatt_exist=False
# print (category_dict[filename])
for i in range(1,250):
try:
blatt=(category_dict[filename]['titel_blatt%02i'%i])
if blatt:
blatt_exist=True
except KeyError:
pass
if blatt_exist:
supplemental+="**Blätter**\n\n"
for i in range(1,250):
try:
blatt=(category_dict[filename]['titel_blatt%02i'%i])
if blatt:
# print (blatt)
supplemental+=' * '+blatt+'\n'
except KeyError:
pass
if os.path.exists(abstract_in):
print ("Reading",abstract_in)
blob = open(abstract_in).read()
m = magic.Magic(mime_encoding=True)
encoding = m.from_buffer(blob)
print (abstract_in,'uses',encoding)
try:
abstract=escape(open(abstract_in).read().decode(encoding).encode('utf8')).replace('Abstract:','').replace('\n','\n\n')
except LookupError:
abstract=open(abstract_in).read().replace(chr(int('0x84',16)),'').replace(chr(int('0x93',16)),'').replace(chr(int('0x96',16)),'')
abstract=xml.sax.saxutils.escape(abstract.decode('iso-8859-1').encode('utf8')).replace('Abstract:','').replace('\n','\n\n')
else:
print ('Abstract',abstract_in,'missing')
if os.path.exists(biblio_in):
print ("Reading",biblio_in)
blob = open(biblio_in).read()
m = magic.Magic(mime_encoding=True)
try:
encoding = m.from_buffer(blob)
print (biblio_in,'uses',encoding)
except magic.MagicException:
encoding='iso-8859-1'
print (biblio_in,'setting encoding to',encoding)
try:
biblio=xml.sax.saxutils.escape(open(biblio_in).read().decode(encoding).encode('utf8'))
except LookupError:
biblio=open(biblio_in).read().replace(chr(int('0x84',16)),'').replace(chr(int('0x93',16)),'').replace(chr(int('0x96',16)),'')
biblio=xml.sax.saxutils.escape(biblio.decode('iso-8859-1').encode('utf8'))
else:
print ('Biblio',biblio_in,'missing')
biblio=""
biblio=biblio.replace('***','').replace('#','').replace('Quellen und weiterführende Literatur:','\n\n####Quellen und weiterführende Literatur: \n')
abstract+=biblio
abstract=abstract.replace('\n',' \n')
xml_file=codecs.open(xml_out, "w", "utf-8")
xml_file=open(xml_out,'w')
ctx.run('chmod {permission} {file}'.format(permission=ctx.permission_file,file=xml_out))
title=filename.replace('_',' ').replace('[','').replace(']','')
title_short=' '.join(title.split(' ')[1:])
keywords=''
category=category1=category2=category3=category4=category5=''
try:
if category_dict[filename]['category1']:
category1=category_dict[filename]['category1']
keywords+=csw.KEYWORD.format(keyword=category_dict[filename]['category1'])
if category_dict[filename]['category2']:
category2=category_dict[filename]['category2']
keywords+=csw.KEYWORD.format(keyword=category_dict[filename]['category2'])
if category_dict[filename]['category3']:
category3=category_dict[filename]['category3']
keywords+=csw.KEYWORD.format(keyword=category_dict[filename]['category3'])
if category_dict[filename]['category4']:
category4=category_dict[filename]['category4']
category=csw.CATEGORY.format(category=category_dict[filename]['category4'].lower())
if category_dict[filename]['category5']:
category5=category_dict[filename]['category5']
keywords+=csw.KEYWORD.format(keyword=category_dict[filename]['category5'])
except KeyError:
pass
# print(category)
region=""
if a034_b:
denominator = int(a034_b.strip().replace(' ',''))
# print ("Set denominator to",denominator)
if denominator < 10000000:
region_list=regions.pos2region(countries,north,south,west,east)
for r in region_list:
if r:
#print (r)
region+=csw.REGION.format(region=r)
try:
year=int(providerDate.replace('[','').replace(']','').replace('?',''))
except:
year=0
a425aa=aseq.get_key(records,ac,"425","a"," ","a")
a425ab=aseq.get_key(records,ac,"425","a"," ","b")
a425ac=aseq.get_key(records,ac,"425","a"," ","c")
if a425aa:
year=a425aa
if a425ab:
year=a425ab
if a425ac:
date=a425ac
print (denominator,title_short,partOf,titleValue)
purpose=titleValue
supplemental=escape(supplemental.decode('utf-8','ignore').encode("utf-8").replace(chr(int('0x0b',16)),''))
abstract=escape(abstract.decode('utf-8','ignore').encode("utf-8").replace(chr(int('0x0b',16)),''))
xml_file.write(csw.CSW.format(id=ac,name=escape(title_short),name_url=escape(name),geonode='http://localhost:8000',geoserver='http://localhost:8080/geoserver',
west=west,east=east,north=north,south=south,z='{z}',x='{x}',y='{y}',
supplemental=supplemental,abstract=abstract,purpose=purpose,keywords=keywords,category=category,region=region,year=year,
denominator=abs(denominator)).replace('\n\n\n\n','\n\n'))
xml_file.close()
if abstract:
abst='yes'
else:
abst='no'
if biblio:
bib='yes'
else:
bib='no'
if west!=0.0 and north!=0.0 and east!=0.0 and south!=0.0:
geo='yes'
else:
geo='no'
#csv_abstract.write(filename+","+abst+"\n")
#csv_import.write(filename+','+str(denominator)+','+geo+','+abst+','+bib+','+category1+','+category2+','+category3+','+category4+','+category5+'\n')
# dc = dublincore.METADATA.format(a331_a=a331_a,a335_a=a335_a,a341_a=a341_a,a343_a=a343_a,
# a345_a=a345_a,a347_a=a347_a,a370aa=a370aa,a359_a=a359_a,
# a100_p=a100_p,a100_d=a100_d,a100_4=a100_4,
# a104ap=a104ap,a104ad=a104ad,a104a4=a104a4,
# a108ap=a108ap,a108ad=a108ad,a108a4=a108a4,
# a112ap=a112ap,a112ad=a112ad,a112a4=a112a4,
# a200_k=a200_k,a200_h=a200_h,a200_4=a200_4,
# a204ak=a204ak,a204ah=a204ah,a204a4=a204a4,
# a208ak=a208ak,a208ah=a208ah,a208a4=a208a4,
# a064aa=a064aa,a407_a=a407_a,
# a433_a=a433_a,a437_a=a437_a,a435_a=a435_a,
# a439_d=a439_d,a501_a=a501_a,abstract=xml.sax.saxutils.escape(abstract),
# filename=xml.sax.saxutils.escape(filename.lower()),
# a419_b=a419_b,a419_a=a419_a,a419_c=a419_c,
# a100bp=a100bp,a100bd=a100bd,a100b4=a100b4,
# a104bp=a104bp,a104bd=a104bd,a104b4=a104b4,
# a108bp=a108bp,a108bd=a108bd,a108b4=a108b4,
# a112bp=a112bp,a112bd=a112bd,a112b4=a112b4,
# a200bk=a200bk,a200bh=a200bh,a200b4=a200b4,
# a204bk=a204bk,a204bh=a204bh,a204b4=a204b4,
# a208bk=a208bk,a208bh=a208bh,a208b4=a208b4,
# a677_p=a677_p,a677_d=a677_d,a677_4=a677_4,
# a425a_=a425a_,a001_a=a001_a,a037ba=a037ba,
# a010_a=a010_a,a453ma=a453ma,a453ra=a453ra,a599_a=a599_a,
# a034_d=a034_d,a034_g=a034_g,a034_e=a034_e,a034_f=a034_f
# )
#dc=dc.replace('<dcterms:alternative> : </dcterms:alternative>\n','')
#dc=dc.replace('<dc:creator>; </dc:creator>\n','')
#dc=dc.replace('<dc:contributor>; </dc:contributor>\n','')
#dc=dc.replace('<dc:date></dc:date>\n','')
#dc=dc.replace('<dcterms:isPartOf></dcterms:isPartOf>\n','')
#dc_import.write(dc)
@task(iterable=['layer'],
help={'layer': "Name of layer or tiff to update.",
'overwrite':"Overwrite existing layer"})
def layer(ctx,_layer=None,_overwrite=False,_all=False):
"""
update layer(s) in geonode
"""
if not _layer and not _all:
print("Use either --layer or --all option")
return
if _all:
if _overwrite:
importlayer='cd {geonode_dir};python ./manage.py importlayers -o -v3 -u {user} {tiff} '.format(geonode_dir=ctx.geonode_dir, user=ctx.user ,tiff=ctx.output_dir)
else:
importlayer='cd {geonode_dir};python ./manage.py importlayers -v3 -u {user} {tiff} '.format(geonode_dir=ctx.geonode_dir, user=ctx.user ,tiff=ctx.output_dir)
ctx.run(importlayer)
return
if isinstance(_layer, basestring):
_layer=(_layer,)
for l in _layer:
l=clean(l).lower()
if l[-4:]==".tif":
l=layer[:-4]
layer_tif=ctx.output_dir+l+'.tif'
layer_xml=ctx.output_dir+l+'.xml'
layer_geo=ctx.output_dir+l+'.geo'
if exists(layer_tif):
if _overwrite:
importlayer='cd {geonode_dir};python ./manage.py importlayers -v3 -u {user} -o {tiff} '.format(geonode_dir=ctx.geonode_dir, user=ctx.user ,tiff=layer_tif)
else:
importlayer='cd {geonode_dir};python ./manage.py importlayers -v3 -u {user} {tiff} '.format(geonode_dir=ctx.geonode_dir, user=ctx.user ,tiff=layer_tif)
ctx.run(importlayer)
else:
print ("Can't find tiff",layer_tif)
cleanup(ctx)
index(ctx)
@task()
def cleanup(ctx):
"""
cleanup temp files
"""
ctx.run('rm -rf {dir}'.format(dir=ctx.gcp_dir))
ctx.run('rm -rf {dir}'.format(dir=ctx.vips_dir))
ctx.run('rm -rf {dir}'.format(dir=ctx.warp_dir))
ctx.run('rm -rf {dir}'.format(dir=ctx.wld_dir))
ctx.run('rm -rf {geonode_dir}/geonode/uploaded/layers/*'.format(geonode_dir=ctx.geonode_dir))
@task()
def permissions(ctx):
"""
set file permissions
"""
ctx.run('chgrp -R {group} {dir}'.format(group=ctx.group,dir=ctx.output_dir))
ctx.run('chmod {permission} {dir}'.format(permission=ctx.permission_directory,dir=ctx.output_dir))
ctx.run('chmod {permission} {dir}/*'.format(permission=ctx.permission_file,dir=ctx.output_dir))
@task()
def statistics(ctx):
"""
show statistics
"""
tifCounter = len(glob.glob1(ctx.output_dir,"*.tif"))
xmlCounter = len(glob.glob1(ctx.output_dir,"*.xml"))
print ("%i GeoTiff"%tifCounter)
print ("%i XML-Metadata"%xmlCounter)
#@task()
#def test_geocoder(ctx):
#
# countries=regions.country2kontinent()
#
# #regions.pos2region(countries,36.0654206327,2.27685164945,25.5277830434,71.2462763724)
# regions.pos2region(countries,47.1319451633,46.9127043394,12.8330743987,13.1941276942)
# #regions.pos2region(countries,5.56634191981,74.035496039,32.775356264,70.8293161903)