diff --git a/examples/parallel/KTH_PDC/lateral_inhibition/sten_1/Dardel_runSnudda_lateral.sh b/examples/parallel/KTH_PDC/lateral_inhibition/sten_1/Dardel_runSnudda_lateral.sh index 28b13e48b..65874b35a 100755 --- a/examples/parallel/KTH_PDC/lateral_inhibition/sten_1/Dardel_runSnudda_lateral.sh +++ b/examples/parallel/KTH_PDC/lateral_inhibition/sten_1/Dardel_runSnudda_lateral.sh @@ -3,7 +3,7 @@ SNUDDA_DIR=$HOME/Snudda/snudda -JOBDIR=networks/lateral_2 +JOBDIR=../networks/sten_1 # SIMSIZE=50000 diff --git a/examples/parallel/KTH_PDC/lateral_inhibition/sten_1/setup_sten_1.py b/examples/parallel/KTH_PDC/lateral_inhibition/sten_1/setup_sten_1.py index 7b3769369..48ba4ff6b 100644 --- a/examples/parallel/KTH_PDC/lateral_inhibition/sten_1/setup_sten_1.py +++ b/examples/parallel/KTH_PDC/lateral_inhibition/sten_1/setup_sten_1.py @@ -40,10 +40,10 @@ # The centre of the cube is [0.00475, 0.004, 0.00775]. num_neurons is optional si.add_population_unit_density(structure_name="Striatum", neuron_types=["dSPN", "iSPN"], unit_centre=np.array([0.00475, 0.004, 0.00775]) -np.array([0, 0, 50e-6]), - probability_function="(d < 200e-6)*1", num_neurons=4000) + probability_function="(d < 300e-6) * 1", num_neurons=4000) si.add_population_unit_density(structure_name="Striatum", neuron_types=["dSPN", "iSPN"], unit_centre=np.array([0.00475, 0.004, 0.00775]) -np.array([0, 0, -50e-6]), - probability_function="(d < 200e-6) * 1", num_neurons=4000) + probability_function="(d < 300e-6) * 1", num_neurons=4000) print("Writing json")