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diff --git a/docs/build/html/py-modindex.html b/docs/build/html/py-modindex.html
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@@ -88,6 +88,12 @@
diff --git a/docs/build/html/search.html b/docs/build/html/search.html
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@@ -86,6 +86,12 @@
Navigation
Introduction
Diagnostic Modeling Overview and Perspectives
Sensitivity Analysis: The Basics
+
Sensitivity Analysis: Diagnostic & Exploratory Modeling
+
Uncertainty Quantification: The Basics
+
Uncertainty Quantification: A Tool For Capturing Risks & Extremes
+
Conclusion
+
References
+
Glossary
diff --git a/docs/build/html/searchindex.js b/docs/build/html/searchindex.js
index 5b825655..b33cfded 100644
--- a/docs/build/html/searchindex.js
+++ b/docs/build/html/searchindex.js
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of model diagnostics","Perspectives on diagnostic model evaluation","Diagnostic Modeling Overview and Perspectives","Global Versus Local Sensitivity","Why Perform Sensitivity Analysis","Sensitivity Analysis Applications for Model Evaluation and Fidelity Testing","Sensitivity Analysis Applications for Exploratory Modeling and Scenario Discovery","One-At-a-Time (OAT)","Full and Fractional Factorial Sampling","Latin Hypercube (LH) Sampling","Low-Discrepancy Sequences","Other types of sampling","Synthetic generation of input time series","Design of Experiments","Derivative-based Methods","Elementary Effect Methods","Regression-based Methods","Regional Sensitivity Analysis","Variance-based Methods","Analysis of Variance (ANOVA)","Moment-Independent (Density-Based) Methods","Sensitivity Analysis Methods","How To Choose A Sensitivity Analysis Method: Model Traits And Dimensionality","Software Toolkits","Sensitivity Analysis: The Basics","Examples","Addressing Uncertainty in MultiSector Dynamics Research","nanites","nanites package","nanites.tests 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13,14,25],yet:[47,49,53],yield:[1,3,5,25,35],ylvisak:55,ym:[4,25],york:55,you:[1,3],your:[5,25,57],z:55,zare:55,zarekarizi:55,zaremba:[11,14,25,55],zeff:55,zellner:[35,55],zhang:55,zhao:55,zscheischler:55},titles:["Introduction","Overview of model diagnostics","Perspectives on diagnostic model evaluation","Diagnostic Modeling Overview and Perspectives","Global Versus Local Sensitivity","Why Perform Sensitivity Analysis","Sensitivity Analysis Applications for Model Evaluation and Fidelity Testing","Sensitivity Analysis Applications for Exploratory Modeling and Scenario Discovery","One-At-a-Time (OAT)","Full and Fractional Factorial Sampling","Latin Hypercube (LH) Sampling","Low-Discrepancy Sequences","Other types of sampling","Synthetic generation of input time series","Design of Experiments","Derivative-based Methods","Elementary Effect Methods","Regression-based Methods","Regional Sensitivity Analysis","Variance-based Methods","Analysis of Variance (ANOVA)","Moment-Independent (Density-Based) Methods","Sensitivity Analysis Methods","How To Choose A Sensitivity Analysis Method: Model Traits And Dimensionality","Software Toolkits","Sensitivity Analysis: The Basics","Understanding Errors: What Is Controlling Model Performance?","Consequential Dynamics: What is Controlling Model Behaviors of Interest?","Consequential Scenarios: What is Controlling Consequential Outcomes?","Sensitivity Analysis: Diagnostic & Exploratory Modeling","Why is Uncertainty Quantification Important for Understanding MultiSector System Dynamics?","Uncertainty Quantification for Exploratory Modeling","Bayesian Uncertainty Quantification","Uncertainty Quantification Under (Deep) Uncertainty","Integrating Model Diagnostics and Uncertainty Quantification","Uncertainty Quantification: The Basics","Understanding Risk: How Probable Are Extreme Events?","Understanding Tails: Statistical Modeling of Extreme Events","How to Choose an Appropriate Method?","How to Select a Prior Distribution?","Posterior Predictive Checking","Model Selection and Comparison","Scenario Discovery","Pre-calibration/GLUE","Metropolis-Hastings","Gibbs Sampling","Hamiltonian Monte Carlo","Markov Chain Monte Carlo","Particle-based Methods","What are Common Methods?","Markov Chain Monte Carlo with the True Model","Markov Chain Monte Carlo with Surrogate Models","What are Example Software Implementations?","Uncertainty Quantification: A Tool For Capturing Risks & Extremes","Conclusion","References","Glossary","Examples","Addressing Uncertainty in MultiSector Dynamics Research","nanites","nanites package","nanites.tests package","Preface"],titleterms:{"import":[30,35],"true":[50,52,53],A:[23,25,53],And:[23,25],At:[8,14,25],For:53,Is:[26,29],One:[8,14,25],The:[25,35],To:[23,25],acknowledg:62,address:58,an:[38,53],analysi:[5,6,7,18,20,22,23,25,29],anova:[20,22,25],applic:[6,7,25],appropri:[38,53],ar:[36,49,52,53],audienc:62,base:[15,17,19,21,22,25,48,49,53],basic:[25,35],bayesian:[32,35],behavior:[27,29],book:62,build:57,calibr:[43,49,53],caption:57,captur:53,carlo:[46,47,49,50,51,52,53],chain:[47,49,50,51,52,53],check:[40,53],choos:[23,25,38,53],codeblock:57,common:[49,53],comparison:[41,53],conclus:54,consequenti:[27,28,29],content:[60,61],control:[26,27,28,29],deep:[33,35],densiti:[21,22,25],depend:[14,25],deriv:[15,22,25],design:[14,25],diagnost:[1,2,3,29,34,35],dimension:[23,25],discoveri:[7,25,42,49,53],discrep:[11,14,25],distribut:[39,53],dynam:[27,29,30,35,58],ebook:[],effect:[16,22,25],elementari:[16,22,25],error:[26,29],evalu:[2,3,6,25],event:[36,37,53],exampl:[52,53,57],experi:[14,25],exploratori:[7,25,29,31,35],extrem:[36,37,53],factori:[9,14,25],fidel:[6,25],figur:57,fraction:[9,14,25],full:[9,14,25],gener:[13,14,25],gibb:[45,47,49,53],global:[4,25],glossari:56,glue:[43,49,53],hamiltonian:[46,47,49,53],hast:[44,47,49,53],how:[23,25,36,38,39,53,62],hypercub:[10,14,25],implement:[52,53],independ:[21,22,25],indic:58,input:[13,14,25],insert:57,instal:62,integr:[34,35],interest:[27,29],introduct:0,latin:[10,14,25],lh:[10,14,25],local:[4,25],low:[11,14,25],markov:[47,49,50,51,52,53],mathjax:57,method:[15,16,17,19,21,22,23,25,38,48,49,53],metropoli:[44,47,49,53],model:[1,2,3,6,7,23,25,26,27,29,31,34,35,37,41,50,51,52,53,60],modul:[60,61],moment:[21,22,25],mont:[46,47,49,50,51,52,53],msd_uncertainty_ebook:62,multisector:[30,35,58],nanit:[59,60,61],note:57,oat:[8,14,25],other:[12,14,25],out:57,outcom:[28,29],overview:[1,3,14,25],packag:[60,61,62],particl:[48,49,53],perform:[5,25,26,29],perspect:[2,3],posterior:[40,53],pre:[43,49,53],predict:[40,53],prefac:62,prior:[39,53],probabl:[36,53],python:62,quantif:[30,31,32,33,34,35,53],refer:55,region:[18,22,25],regress:[17,22,25],research:58,risk:[36,53],sampl:[9,10,12,14,25,45,47,49,53],scenario:[7,25,28,29,42,49,53],section:[14,25],select:[39,41,53],sensit:[4,5,6,7,18,22,23,25,29],sequenc:[11,14,25],seri:[13,14,25],size:[14,25],softwar:[24,25,52,53],statist:[37,53],submodul:[60,61],subpackag:60,summari:[14,25],surrog:[51,52,53],synthet:[13,14,25],system:[30,35],tabl:58,tail:[37,53],test:[6,25,57,61],test_model:61,thi:[14,25,62],time:[8,13,14,25],tool:53,toolkit:[24,25],trait:[23,25],type:[12,14,25],uncertainti:[30,31,32,33,34,35,53,58],under:[33,35],understand:[26,29,30,35,36,37,53],us:[57,62],varianc:[19,20,22,25],versu:[4,25],what:[26,27,28,29,49,52,53],why:[5,25,30,35]}})
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diff --git a/docs/build/latex/addressinguncertaintyinmultisectordynamicsresearch.aux b/docs/build/latex/addressinguncertaintyinmultisectordynamicsresearch.aux
index 994315cd..fdd5df75 100644
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+++ b/docs/build/latex/addressinguncertaintyinmultisectordynamicsresearch.aux
@@ -93,8 +93,88 @@
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Chapter 1.
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Chapter 2.
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