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dbkeator edited this page Jan 11, 2012 · 14 revisions

input output terms

input: input parameter(s) for a process

output: output from a process

cmdline: command line for executables

brain_only: image containing only the brain

segmentation: segmented image

parcellation: parcellated image

warp_field

transform

affine_transform

rigid_body_transform

realignment_parameters

contrast_image

contrast

statistic

t_statistic

F_statistic

z_statistic

surface

freesurfer_surface

vtk_surface

annotation: annotated surface

atlas

mni_atlas

talairach_atlas

probability_map

prior

template

t1_template

t2_template

glm_design

  • number of regressors

process terms

slice_timing_correction

registration

normalization

model_estimation

timeseries_realignment

eddy_current_correction

surface_creation

dimensionality_reduction

smoothing

temporal_filtering

whitening

functional (meta)analysis/publication terms (Tom Nichols)

Citation: bibliographic reference Atlas: atlas description Name: Canonical name of atlas space SearchVol: type and size of search region Effect: One experimental result, statistic map or "contrast" Peak: Description of a single peak location Authors: Authors in the published study Title: Title of the published study Journal: Name of the journal of published study Volume: Volume number of published study Pages: Page numbers of published study PMCID: PubMed Central reference number of published study DOI: Digital object identifier of published study Conversion: Name of transformation, if any, applied to place the coordinates in this space Software: Name and version of software used to register Template: Name of template image WarpType: Type of warping WarpName: Warping parameters Type: Description of search volume

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