diff --git a/README.md b/README.md index c5ca76e9..fc332148 100644 --- a/README.md +++ b/README.md @@ -14,8 +14,6 @@ of structural variants which can be identified in the absence of copy number analysis and large-scale assembly. See the user guide for a full description of capabilities and limitations. -_Note: This software is under development and not supported for general use._ - Build instructions ------------------ diff --git a/src/python/bin/configManta.py.ini b/src/python/bin/configManta.py.ini index 19593478..35935ad7 100644 --- a/src/python/bin/configManta.py.ini +++ b/src/python/bin/configManta.py.ini @@ -7,7 +7,7 @@ referenceFasta = /illumina/development/Isis/Genomes/Homo_sapiens/UCSC/hg19/Sequence/WholeGenomeFasta/genome.fa # Run discovery and candidate reporting for all SVs/indels at or above this size: -minCandidateVariantSize = 10 +minCandidateVariantSize = 7 # After candidate identification, only score and report SVs/indels at or above this size: minScoredVariantSize = 51