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CHANGELOG.txt
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CHANGELOG.txt
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# 0.0.38 (08.04.2024) (@Isy89)
- Fix `AttributeError: module 'pyranges' has no attribute 'from_dfs'` causing to_ranges function to return a pandas
Dataframe instead of PyRanges object (#9)
# 0.0.37 (18.05.23)
- remove option to return 32-bit PyRanges
# 0.0.36 (01.05.22)
- Update numpy types
# 0.0.35 (27.05.22)
- update np.long to np.int to avoid depr warnings
# 0.0.34 (03.02.22)
- attempt to fix #5
# 0.0.33 (10.06.21)
- fix bug in setup.py
# 0.0.32 (25.02.21)
- fix bug in .stranded
# 0.0.31 (unreleased)
- helper method make_strands_same_length to rledicts
# 0.0.30 (14.01.20)
- add unary negation to rle/rledict
- add apply, apply_values and apply_runs to rle/rledict
- add iter to rledict to for loop through keys/values
- subsetting an RLE with a dataframe now returns a dataframe
- printing rles respects terminal width
- add copy() to rledict
- add shift to rle/rledict
- add .length property to Rle which gives sum of runs
- allow for empty constructors (Rle() and PyRles())
- add .chromosomes property to rledict
- add len() to PyRles
- rledicts now also have a to_csv method
- add to_table to rledict
# 0.0.29 (21.01.19)
- try to fix bug when subsetting with pyranges
# 0.0.28 (17.01.19)
- improve speed when subsetting with pyranges
# 0.0.27 (10.01.19)
- better api for subsetting rles with dfs
# 0.0.26 (07.01.19)
- better api for subsetting with pyranges
# 0.0.25 (24.10.19)
- allow creating pyrle from values only (thanks Alistair Miles)
# 0.0.23 (09.05.19)
- remove pyranges dependency