test for documentation

JLX0 · Jan 15, 2025 · f3ce74d · f3ce74d
1 parent c4b4f6b
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Showing 195 changed files with 5 additions and 5 deletions.
diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
@@ -7,13 +7,13 @@ repos:
     rev: 24.8.0
     hooks:
       - id: black
-        exclude: examples/|docs/
+        exclude: examples/|docs/|docs_source/
 
   - repo: https://github.com/pycqa/flake8
     rev: 7.1.1
     hooks:
       - id: flake8
-        exclude: examples/|docs/
+        exclude: examples/|docs/|docs_source/
         args: [
             "--max-line-length=99",
             "--ignore=E203,E704,W503",
@@ -24,7 +24,7 @@ repos:
     rev: 5.13.2
     hooks:
       - id: isort
-        exclude: examples/|docs/
+        exclude: examples/|docs/|docs_source/
 
   - repo: https://github.com/pre-commit/mirrors-mypy
     rev: v1.11.2
@@ -45,7 +45,7 @@ repos:
           "types-tqdm",
           "typing_extensions>=3.10.0.0",
         ]
-        exclude: examples/|docs/
+        exclude: examples/|docs/|docs_source/
         args: [
           --warn-unused-configs,
           --disallow-untyped-calls,

diff --git a/docs/build/html/.buildinfo → docs/.buildinfo b/docs/build/html/.buildinfo → docs/.buildinfo
diff --git a/docs/build/html/.nojekyll → docs/.nojekyll b/docs/build/html/.nojekyll → docs/.nojekyll
diff --git a/...b4098b1f09b/_examples_gallery_jupyter.zip → ...b4098b1f09b/_examples_gallery_jupyter.zip b/...b4098b1f09b/_examples_gallery_jupyter.zip → ...b4098b1f09b/_examples_gallery_jupyter.zip
diff --git a/...461766e842d8/_examples_gallery_python.zip → ...461766e842d8/_examples_gallery_python.zip b/...461766e842d8/_examples_gallery_python.zip → ...461766e842d8/_examples_gallery_python.zip
diff --git a/...ac9126120b3d68282628a/get_github_link.zip → ...ac9126120b3d68282628a/get_github_link.zip b/...ac9126120b3d68282628a/get_github_link.zip → ...ac9126120b3d68282628a/get_github_link.zip
diff --git a/...c4ca713c4c2ffc5cf7fe0a/explain_a_paper.py → ...c4ca713c4c2ffc5cf7fe0a/explain_a_paper.py b/...c4ca713c4c2ffc5cf7fe0a/explain_a_paper.py → ...c4ca713c4c2ffc5cf7fe0a/explain_a_paper.py
diff --git a/...548aa19dc70068ff49c/get_github_link.ipynb → ...548aa19dc70068ff49c/get_github_link.ipynb b/...548aa19dc70068ff49c/get_github_link.ipynb → ...548aa19dc70068ff49c/get_github_link.ipynb
diff --git a/...170cdb16d18c882a440b57/get_github_link.py → ...170cdb16d18c882a440b57/get_github_link.py b/...170cdb16d18c882a440b57/get_github_link.py → ...170cdb16d18c882a440b57/get_github_link.py
diff --git a/...95b637770dd7df2b2682b/explain_a_paper.zip → ...95b637770dd7df2b2682b/explain_a_paper.zip b/...95b637770dd7df2b2682b/explain_a_paper.zip → ...95b637770dd7df2b2682b/explain_a_paper.zip
diff --git a/...7b9ed455c7223663372/explain_a_paper.ipynb → ...7b9ed455c7223663372/explain_a_paper.ipynb b/...7b9ed455c7223663372/explain_a_paper.ipynb → ...7b9ed455c7223663372/explain_a_paper.ipynb
diff --git a/...ml/_examples_gallery/explain_a_paper.html → docs/_examples_gallery/explain_a_paper.html b/...ml/_examples_gallery/explain_a_paper.html → docs/_examples_gallery/explain_a_paper.html
diff --git a/...ml/_examples_gallery/get_github_link.html → docs/_examples_gallery/get_github_link.html b/...ml/_examples_gallery/get_github_link.html → docs/_examples_gallery/get_github_link.html
diff --git a/docs/build/html/_examples_gallery/index.html → docs/_examples_gallery/index.html b/docs/build/html/_examples_gallery/index.html → docs/_examples_gallery/index.html
diff --git a/..._examples_gallery/sg_execution_times.html → ..._examples_gallery/sg_execution_times.html b/..._examples_gallery/sg_execution_times.html → ..._examples_gallery/sg_execution_times.html
diff --git a/...images/sphx_glr_explain_a_paper_thumb.png → ...images/sphx_glr_explain_a_paper_thumb.png b/...images/sphx_glr_explain_a_paper_thumb.png → ...images/sphx_glr_explain_a_paper_thumb.png
diff --git a/...images/sphx_glr_get_github_link_thumb.png → ...images/sphx_glr_get_github_link_thumb.png b/...images/sphx_glr_get_github_link_thumb.png → ...images/sphx_glr_get_github_link_thumb.png
diff --git a/...plementation/code_availability_check.html → ...plementation/code_availability_check.html b/...plementation/code_availability_check.html → ...plementation/code_availability_check.html
diff --git a/...l/_modules/auto_research/search/core.html → docs/_modules/auto_research/search/core.html b/...l/_modules/auto_research/search/core.html → docs/_modules/auto_research/search/core.html
diff --git a/...s/auto_research/search/data_retrival.html → ...s/auto_research/search/data_retrival.html b/...s/auto_research/search/data_retrival.html → ...s/auto_research/search/data_retrival.html
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diff --git a/...odules/auto_research/search/keywords.html → ...odules/auto_research/search/keywords.html b/...odules/auto_research/search/keywords.html → ...odules/auto_research/search/keywords.html
diff --git a/...auto_research/search/post_processing.html → ...auto_research/search/post_processing.html b/...auto_research/search/post_processing.html → ...auto_research/search/post_processing.html
diff --git a/...l/_modules/auto_research/survey/core.html → docs/_modules/auto_research/survey/core.html b/...l/_modules/auto_research/survey/core.html → docs/_modules/auto_research/survey/core.html
diff --git a/...es/auto_research/survey/paper_reader.html → ...es/auto_research/survey/paper_reader.html b/...es/auto_research/survey/paper_reader.html → ...es/auto_research/survey/paper_reader.html
diff --git a/...modules/auto_research/survey/prompts.html → ...modules/auto_research/survey/prompts.html b/...modules/auto_research/survey/prompts.html → ...modules/auto_research/survey/prompts.html
diff --git a/...l/_modules/auto_research/utils/files.html → docs/_modules/auto_research/utils/files.html b/...l/_modules/auto_research/utils/files.html → docs/_modules/auto_research/utils/files.html
diff --git a/...ules/auto_research/utils/stored_info.html → ...ules/auto_research/utils/stored_info.html b/...ules/auto_research/utils/stored_info.html → ...ules/auto_research/utils/stored_info.html
diff --git a/docs/build/html/_modules/index.html → docs/_modules/index.html b/docs/build/html/_modules/index.html → docs/_modules/index.html
diff --git a/..._examples_gallery/explain_a_paper.rst.txt → ..._examples_gallery/explain_a_paper.rst.txt b/..._examples_gallery/explain_a_paper.rst.txt → ..._examples_gallery/explain_a_paper.rst.txt
diff --git a/..._examples_gallery/get_github_link.rst.txt → ..._examples_gallery/get_github_link.rst.txt b/..._examples_gallery/get_github_link.rst.txt → ..._examples_gallery/get_github_link.rst.txt
diff --git a/.../_sources/_examples_gallery/index.rst.txt → .../_sources/_examples_gallery/index.rst.txt b/.../_sources/_examples_gallery/index.rst.txt → .../_sources/_examples_gallery/index.rst.txt
diff --git a/...amples_gallery/sg_execution_times.rst.txt → ...amples_gallery/sg_execution_times.rst.txt b/...amples_gallery/sg_execution_times.rst.txt → ...amples_gallery/sg_execution_times.rst.txt
diff --git a/docs/build/html/_sources/api.rst.txt → docs/_sources/api.rst.txt b/docs/build/html/_sources/api.rst.txt → docs/_sources/api.rst.txt
diff --git a/docs/build/html/_sources/index.rst.txt → docs/_sources/index.rst.txt b/docs/build/html/_sources/index.rst.txt → docs/_sources/index.rst.txt
diff --git a/.../build/html/_sources/installation.rst.txt → docs/_sources/installation.rst.txt b/.../build/html/_sources/installation.rst.txt → docs/_sources/installation.rst.txt
diff --git a/.../html/_sources/sg_execution_times.rst.txt → docs/_sources/sg_execution_times.rst.txt b/.../html/_sources/sg_execution_times.rst.txt → docs/_sources/sg_execution_times.rst.txt
diff --git a/...mentation.code_availability_check.rst.txt → ...mentation.code_availability_check.rst.txt b/...mentation.code_availability_check.rst.txt → ...mentation.code_availability_check.rst.txt
diff --git a/...de/auto_research.reimplementation.rst.txt → ...de/auto_research.reimplementation.rst.txt b/...de/auto_research.reimplementation.rst.txt → ...de/auto_research.reimplementation.rst.txt
diff --git a/...sources/target_code/auto_research.rst.txt → ...sources/target_code/auto_research.rst.txt b/...sources/target_code/auto_research.rst.txt → ...sources/target_code/auto_research.rst.txt
diff --git a/...et_code/auto_research.search.core.rst.txt → ...et_code/auto_research.search.core.rst.txt b/...et_code/auto_research.search.core.rst.txt → ...et_code/auto_research.search.core.rst.txt
diff --git a/...uto_research.search.data_retrival.rst.txt → ...uto_research.search.data_retrival.rst.txt b/...uto_research.search.data_retrival.rst.txt → ...uto_research.search.data_retrival.rst.txt
diff --git a/..._research.search.files_management.rst.txt → ..._research.search.files_management.rst.txt b/..._research.search.files_management.rst.txt → ..._research.search.files_management.rst.txt
diff --git a/.../auto_research.search.information.rst.txt → .../auto_research.search.information.rst.txt b/.../auto_research.search.information.rst.txt → .../auto_research.search.information.rst.txt
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diff --git a/...o_research.search.post_processing.rst.txt → ...o_research.search.post_processing.rst.txt b/...o_research.search.post_processing.rst.txt → ...o_research.search.post_processing.rst.txt
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diff --git a/docs/build/doctrees/target_code/auto_research.search.keywords.doctree b/docs/build/doctrees/target_code/auto_research.search.keywords.doctree
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diff --git a/docs/build/doctrees/target_code/auto_research.survey.paper_reader.doctree b/docs/build/doctrees/target_code/auto_research.survey.paper_reader.doctree
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diff --git a/docs/build/doctrees/target_code/auto_research.utils.doctree b/docs/build/doctrees/target_code/auto_research.utils.doctree
diff --git a/docs/build/doctrees/target_code/auto_research.utils.files.doctree b/docs/build/doctrees/target_code/auto_research.utils.files.doctree
diff --git a/docs/build/doctrees/target_code/auto_research.utils.stored_info.doctree b/docs/build/doctrees/target_code/auto_research.utils.stored_info.doctree
diff --git a/docs/build/doctrees/target_code/auto_research.version.doctree b/docs/build/doctrees/target_code/auto_research.version.doctree
diff --git a/docs/build/doctrees/target_code/modules.doctree b/docs/build/doctrees/target_code/modules.doctree
diff --git a/docs/build/html/genindex.html → docs/genindex.html b/docs/build/html/genindex.html → docs/genindex.html
diff --git a/docs/build/html/index.html → docs/index.html b/docs/build/html/index.html → docs/index.html
diff --git a/docs/build/html/installation.html → docs/installation.html b/docs/build/html/installation.html → docs/installation.html
diff --git a/docs/build/html/objects.inv → docs/objects.inv b/docs/build/html/objects.inv → docs/objects.inv
diff --git a/docs/build/html/py-modindex.html → docs/py-modindex.html b/docs/build/html/py-modindex.html → docs/py-modindex.html
@@ -115,7 +115,7 @@ <h1>Python Module Index</h1>
        <strong>a</strong></td><td></td></tr>
      <tr>
        <td><img src="_static/minus.png" class="toggler"
-              id="toggle-1" style="display: none" alt="-" /></td>
+                id="toggle-1" style="display: none" alt="-" /></td>
        <td>
        <a href="target_code/auto_research.html#module-auto_research"><code class="xref">auto_research</code></a></td><td>
        <em></em></td></tr>

diff --git a/docs/build/html/search.html → docs/search.html b/docs/build/html/search.html → docs/search.html
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diff --git a/...build/html/target_code/auto_research.html → docs/target_code/auto_research.html b/...build/html/target_code/auto_research.html → docs/target_code/auto_research.html
diff --git a/...plementation.code_availability_check.html → ...plementation.code_availability_check.html b/...plementation.code_availability_check.html → ...plementation.code_availability_check.html
diff --git a/..._code/auto_research.reimplementation.html → ..._code/auto_research.reimplementation.html b/..._code/auto_research.reimplementation.html → ..._code/auto_research.reimplementation.html
diff --git a/...arget_code/auto_research.search.core.html → ...arget_code/auto_research.search.core.html b/...arget_code/auto_research.search.core.html → ...arget_code/auto_research.search.core.html
diff --git a/...e/auto_research.search.data_retrival.html → ...e/auto_research.search.data_retrival.html b/...e/auto_research.search.data_retrival.html → ...e/auto_research.search.data_retrival.html
diff --git a/...uto_research.search.files_management.html → ...uto_research.search.files_management.html b/...uto_research.search.files_management.html → ...uto_research.search.files_management.html
diff --git a/...tml/target_code/auto_research.search.html → docs/target_code/auto_research.search.html b/...tml/target_code/auto_research.search.html → docs/target_code/auto_research.search.html
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diff --git a/...auto_research.search.post_processing.html → ...auto_research.search.post_processing.html b/...auto_research.search.post_processing.html → ...auto_research.search.post_processing.html
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diff --git a/...tml/target_code/auto_research.survey.html → docs/target_code/auto_research.survey.html b/...tml/target_code/auto_research.survey.html → docs/target_code/auto_research.survey.html
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diff --git a/...et_code/auto_research.survey.prompts.html → ...et_code/auto_research.survey.prompts.html b/...et_code/auto_research.survey.prompts.html → ...et_code/auto_research.survey.prompts.html
diff --git a/...arget_code/auto_research.utils.files.html → ...arget_code/auto_research.utils.files.html b/...arget_code/auto_research.utils.files.html → ...arget_code/auto_research.utils.files.html
diff --git a/...html/target_code/auto_research.utils.html → docs/target_code/auto_research.utils.html b/...html/target_code/auto_research.utils.html → docs/target_code/auto_research.utils.html
diff --git a/...code/auto_research.utils.stored_info.html → ...code/auto_research.utils.stored_info.html b/...code/auto_research.utils.stored_info.html → ...code/auto_research.utils.stored_info.html
diff --git a/...ml/target_code/auto_research.version.html → docs/target_code/auto_research.version.html b/...ml/target_code/auto_research.version.html → docs/target_code/auto_research.version.html
diff --git a/docs/build/html/target_code/modules.html → docs/target_code/modules.html b/docs/build/html/target_code/modules.html → docs/target_code/modules.html
diff --git a/docs/Makefile → docs_source/Makefile b/docs/Makefile → docs_source/Makefile
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