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不同分辨率patch 特征如何获取? #16

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CV-ZhangXin opened this issue Dec 20, 2024 · 3 comments
Open

不同分辨率patch 特征如何获取? #16

CV-ZhangXin opened this issue Dec 20, 2024 · 3 comments

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@CV-ZhangXin
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非常感谢你们的杰出工作,

我想问一下,下载TCGA-RCC数据集之后,怎么获得低分辨和高分辨率下的Patch特征。

@CV-ZhangXin
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@Jiangbo-Shi

@smart0eddie
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I modify a few arguments as the following.
However, I'm not sure if the way I process the patches of different scale is correct.
The reproduction results I got is about 5% lower than their paper.

create_patches_fp.py
// 10x
// "--patch_size", "1024",
// "--step_size", "1024",

// 5x
"--patch_size", "2048",
"--step_size", "2048",

feature_extraction/patch_generation.py
//"--SAVE_FOLDER_PATH", "$PATH_TO_1024_PATCH"
//"--define_patch_size", "1024"

"--SAVE_FOLDER_PATH", "$PATH_TO_2048_PATCH"
"--define_patch_size", "2048"

feature_extraction/patch_extraction.py
//"--patches_path", "$PATH_TO_1024_PATCH"
//"--library_path", "$PATH_TO_1024_FEATURES"

"--patches_path", "$PATH_TO_2048_PATCH"
"--library_path", "$PATH_TO_2048_FEATURES"

main.py
"--data_folder_s", "$PATH_TO_2048_FEATURES",
"--data_folder_l", "$PATH_TO_1024_FEATURES",

@CV-ZhangXin
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CV-ZhangXin commented Jan 28, 2025 via email

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