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-[tool.poetry.dependencies] -python = "^3.10" -torch = "^2.2.0" -matplotlib = "^3.3.4" -tensorboardX = "^2.1" -tqdm = "^4.59.0" -hydra-core = "^1.2.0" -scikit-learn = "^1.5.2" -pandas = "^2.2.3" - -[tool.poetry.dev-dependencies] +requires-python = ">=3.10" +dependencies = [ + "torch>=2.2.0", + "matplotlib>=3.3.4", + "tensorboardX>=2.1", + "tqdm>=4.59.0", + "hydra-core>=1.2.0", + "scikit-learn>=1.5.2", + "pandas>=2.2.3" +] [build-system] -requires = ["poetry>=0.12"] -build-backend = "poetry.masonry.api" +requires = ["hatchling"] +build-backend = "hatchling.build" \ No newline at end of file diff --git a/requirements.txt b/requirements.txt new file mode 100644 index 0000000..5f283d5 --- /dev/null +++ b/requirements.txt @@ -0,0 +1,85 @@ +# This file was autogenerated by uv via the following command: +# uv pip compile pyproject.toml -o requirements.txt +antlr4-python3-runtime==4.9.3 + # via + # hydra-core + # omegaconf +contourpy==1.3.0 + # via matplotlib +cycler==0.12.1 + # via matplotlib +filelock==3.16.1 + # via torch +fonttools==4.54.1 + # via matplotlib +fsspec==2024.10.0 + # via torch +hydra-core==1.3.2 + # via tsa (pyproject.toml) +jinja2==3.1.4 + # via torch +joblib==1.4.2 + # via scikit-learn +kiwisolver==1.4.7 + # via matplotlib +markupsafe==3.0.2 + # via jinja2 +matplotlib==3.9.2 + # via tsa (pyproject.toml) +mpmath==1.3.0 + # via sympy +networkx==3.4.2 + # via torch +numpy==2.1.2 + # via + # contourpy + # matplotlib + # pandas + # scikit-learn + # scipy + # tensorboardx +omegaconf==2.3.0 + # via hydra-core +packaging==24.1 + # via + # hydra-core + # matplotlib + # tensorboardx +pandas==2.2.3 + # via tsa (pyproject.toml) +pillow==11.0.0 + # via matplotlib +protobuf==5.28.3 + # via tensorboardx +pyparsing==3.2.0 + # via matplotlib +python-dateutil==2.9.0.post0 + # via + # matplotlib + # pandas +pytz==2024.2 + # via pandas +pyyaml==6.0.2 + # via omegaconf +scikit-learn==1.5.2 + # via tsa (pyproject.toml) +scipy==1.14.1 + # via scikit-learn +setuptools==75.2.0 + # via torch +six==1.16.0 + # via python-dateutil +sympy==1.13.1 + # via torch +tensorboardx==2.6.2.2 + # via tsa (pyproject.toml) +threadpoolctl==3.5.0 + # via scikit-learn +torch==2.5.0 + # via tsa (pyproject.toml) +tqdm==4.66.5 + # via tsa (pyproject.toml) +typing-extensions==4.12.2 + # via torch +tzdata==2024.2 + # via pandas From 1fedd0f9fdaaa78ef6a35df35b7ddab1971c79b6 Mon Sep 17 00:00:00 2001 From: Jules Date: Sun, 27 Oct 2024 10:01:42 +0100 Subject: [PATCH 2/2] [README.md] - docs: update installation instructions with alternatives - Include collapsible sections for using `uv` and `requirements.txt` for dependency installation - Provide an option to install dependencies via `uv` as well as directly using `requirements.txt` --- README.md | 30 ++++++++++++++++++++++++++---- 1 file changed, 26 insertions(+), 4 deletions(-) diff --git a/README.md b/README.md index 844a11e..7783a16 100644 --- a/README.md +++ b/README.md @@ -20,14 +20,36 @@ To clone the repository please run: git clone https://github.com/JulesBelveze/time-series-autoencoder.git ``` -To install all the required dependencies please run: +
+Use [uv](https://docs.astral.sh/uv/) + +Then install `uv` +```shell +# install uv +curl -LsSf https://astral.sh/uv/install.sh | sh # linux/mac +# or +brew install uv # mac with homebrew ``` -python3 -m venv .venv/tsa -source .venv/tsa/bin/activate -poetry install + +# setup environment and install dependencies +```bash +cd time-series-autoencoder +uv venv +uv pip sync pyproject.toml ``` +
+ +
+Install directly from `requirements.txt` + +```shell +pip install -r requirements.txt +``` + +
+ ## Usage The project uses [Hydra](https://hydra.cc/docs/intro/) as a configuration parser. You can simply change the parameters