Process completed with exit code 1.

Process completed with exit code 1.

Process completed with exit code 1.

failed to run `@example` block in src/applications/cell_simulations.md:193-218 ```@example cell_simulations rng = StableRNG(123444) a, b, c, d = -2.0, 2.0, -5.0, 5.0 points = [(a + (b - a) * rand(rng), c + (d - c) * rand(rng)) for _ in 1:10] tri = triangulate(points; rng=rng) cells = CellModel(; tri=tri, new_r_cache=similar(points), α=5.0, s=2.0, Δt=1e-3, β=0.25, K=100.0^2, rng, final_time=25.0, ϵ=0.5) results = simulate_cells(cells); fig = Figure(fontsize=26) title_obs = Observable(L"t = %$(0.0)") ax1 = Axis(fig[1, 1], width=1200, height=400, title=title_obs, titlealign=:left) Δt = cells.Δt i = Observable(1) voronoiplot!(ax1, @lift(voronoi(triangulate(results[$i]; rng), clip=true, rng=rng)), color=:darkgreen, strokecolor=:black, strokewidth=2, show_generators=false) xlims!(ax1, -12, 12) ylims!(ax1, -12, 12) resize_to_layout!(fig) t = 0:Δt:cells.final_time record(fig, "cell_simulation.mp4", 1:10:length(t); framerate=60) do ii i[] = ii title_obs[] = L"t = %$(((ii-1) * Δt))" end; nothing #hide ``` exception = UndefVarError: `voronoiplot!` not defined Stacktrace: [1] top-level scope @ cell_simulations.md:207 [2] eval @ ./boot.jl:385 [inlined] [3] #58 @ ~/.julia/packages/Documenter/pA5Sa/src/expander_pipeline.jl:754 [inlined] [4] cd(f::Documenter.var"#58#60"{Module, Expr}, dir::String) @ Base.Filesystem ./file.jl:112 [5] (::Documenter.var"#57#59"{Documenter.Page, Module, Expr})() @ Documenter ~/.julia/packages/Documenter/pA5Sa/src/expander_pipeline.jl:753 [6] (::IOCapture.var"#4#7"{DataType, Documenter.var"#57#59"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})() @ IOCapture ~/.julia/packages/IOCapture/Rzdxd/src/IOCapture.jl:161 [7] with_logstate(f::Function, logstate::Any) @ Base.CoreLogging ./logging.jl:515 [8] with_logger @ ./logging.jl:627 [inlined] [9] capture(f::Documenter.var"#57#59"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer) @ IOCapture ~/.julia/packages/IOCapture/Rzdxd/src/IOCapture.jl:158 [10] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document) @ Documenter ~/.julia/packages/Documenter/pA5Sa/src/expander_pipeline.jl:752

failed to run `@example` block in src/applications/interpolation.md:23-57 ```@example interpolation using DelaunayTriangulation #hide using CairoMakie #hide A, B, C, D, E, F, G, H = (0.3, 1.1), (-0.1, 0.8), (0.2, 0.3), (0.6, 0.2), (0.8, 0.8), (0.3, 0.9), (0.5503600264347, 0.6814266789918), (1.1, 0.5) #hide G2 = (0.5496217775447, 0.7146478790414) #hide fig = Figure() #hide ax = Axis(fig[1, 1], width=400, height=400, title="Original") #hide xlims!(ax, -0.2, 1.3) #hide ylims!(ax, 0.1, 1.2) #hide points = [A, B, C, D, E, F, G, H] #hide triplot!(ax, points, show_points=true) #hide scatter!(ax, [G], color=:red, markersize=14) #hide hidedecorations!(ax) #hide ax2 = Axis(fig[2, 1], width=400, height=400) #hide voronoiplot!(ax2, points, clip=(-0.2, 1.3, 0.1, 1.2)) #hide xlims!(ax2, -0.2, 1.3) #hide ylims!(ax2, 0.1, 1.2) #hide scatter!(ax2, [G], color=:red, markersize=14) #hide hidedecorations!(ax2) #hide ax3 = Axis(fig[1, 2], width=400, height=400, title="Perturbed") #hide points = [A, B, C, D, E, F, G2, H] #hide triplot!(ax3, points, show_points=true) #hide hidedecorations!(ax3) #hide xlims!(ax3, -0.2, 1.3) #hide ylims!(ax3, 0.1, 1.2) #hide scatter!(ax3, [G2], color=:red, markersize=14) #hide ax4 = Axis(fig[2, 2], width=400, height=400) #hide voronoiplot!(ax4, points, clip=(-0.2, 1.3, 0.1, 1.2)) #hide scatter!(ax4, [G2], color=:red, markersize=14) #hide xlims!(ax4, -0.2, 1.3) #hide ylims!(ax4, 0.1, 1.2) #hide hidedecorations!(ax4) #hide resize_to_layout!(fig) #hide fig #hide ``` exception = UndefVarError: `triplot!` not defined Stacktrace: [1] top-level scope @ interpolation.md:33 [2] eval @ ./boot.jl:385 [inlined] [3] #58 @ ~/.julia/packages/Documenter/pA5Sa/src/expander_pipeline.jl:754 [inlined] [4] cd(f::Documenter.var"#58#60"{Module, Expr}, dir::String) @ Base.Filesystem ./file.jl:112 [5] (::Documenter.var"#57#59"{Documenter.Page, Module, Expr})() @ Documenter ~/.julia/packages/Documenter/pA5Sa/src/expander_pipeline.jl:753 [6] (::IOCapture.var"#4#7"{DataType, Documenter.var"#57#59"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})() @ IOCapture ~/.julia/packages/IOCapture/Rzdxd/src/IOCapture.jl:161 [7] with_logstate(f::Function, logstate::Any) @ Base.CoreLogging ./logging.jl:515 [8] with_logger @ ./logging.jl:627 [inlined] [9] capture(f::Documenter.var"#57#59"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer) @ IOCapture ~/.julia/packages/IOCapture/Rzdxd/src/IOCapture.jl:158 [10] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document) @ Documenter ~/.julia/packages/Documenter/pA5Sa/src/expander_pipeline.jl:752

failed to run `@example` block in src/applications/interpolation.md:120-138 ```@example interpolation using CairoMakie using StableRNGs using ElasticArrays rng = StableRNG(999) points = ElasticMatrix(randn(rng, 2, 50)) # so that the points are mutable tri = triangulate(points; rng) envelope_vertices, envelope_points = compute_envelope(tri, (0.5, 0.5)) fig = Figure(fontsize=24) ax = Axis(fig[1, 1], width=400, height=400) triplot!(ax, tri, show_points=true) ax2 = Axis(fig[1, 2], width=400, height=400) add_point!(tri, 0.5, 0.5) triplot!(ax2, tri, show_points=true) poly!(ax2, envelope_points, color=(:red, 0.2)) resize_to_layout!(fig) fig ``` exception = UndefVarError: `triplot!` not defined Stacktrace: [1] top-level scope @ interpolation.md:131 [2] eval @ ./boot.jl:385 [inlined] [3] #58 @ ~/.julia/packages/Documenter/pA5Sa/src/expander_pipeline.jl:754 [inlined] [4] cd(f::Documenter.var"#58#60"{Module, Expr}, dir::String) @ Base.Filesystem ./file.jl:112 [5] (::Documenter.var"#57#59"{Documenter.Page, Module, Expr})() @ Documenter ~/.julia/packages/Documenter/pA5Sa/src/expander_pipeline.jl:753 [6] (::IOCapture.var"#4#7"{DataType, Documenter.var"#57#59"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})() @ IOCapture ~/.julia/packages/IOCapture/Rzdxd/src/IOCapture.jl:161 [7] with_logstate(f::Function, logstate::Any) @ Base.CoreLogging ./logging.jl:515 [8] with_logger @ ./logging.jl:627 [inlined] [9] capture(f::Documenter.var"#57#59"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer) @ IOCapture ~/.julia/packages/IOCapture/Rzdxd/src/IOCapture.jl:158 [10] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document) @ Documenter ~/.julia/packages/Documenter/pA5Sa/src/expander_pipeline.jl:752

failed to run `@example` block in src/applications/interpolation.md:157-181 ```@example interpolation fig = Figure(fontsize=24) ax = Axis(fig[1, 1], width=400, height=400) triplot!(ax, tri, show_points=true) lines!(ax, envelope_points, color=:red) j = 7 # example vertex v = envelope_vertices[j] scatter!(ax, [get_point(tri, v)], color=:blue) first_neighbour = envelope_vertices[j-1] next_triangle = get_adjacent(tri, first_neighbour, v) next_triangle_2 = get_adjacent(tri, v, envelope_vertices[j+1]) last_neighbour = envelope_vertices[j+1] polygon_points = [ get_point(tri, v), (get_point(tri, v) .+ get_point(tri, last_neighbour)) ./ 2, DelaunayTriangulation.triangle_circumcenter(tri, (v, envelope_vertices[j+1], next_triangle_2)), DelaunayTriangulation.triangle_circumcenter(tri, (first_neighbour, v, next_triangle)), (get_point(tri, v) .+ get_point(tri, first_neighbour)) ./ 2 ] poly!(ax, polygon_points, color=(:blue, 0.5), strokecolor=:blue, strokewidth=2) xlims!(ax, -0.5, 1.4) ylims!(ax, -0.15, 1.4) resize_to_layout!(fig) fig ``` exception = UndefVarError: `triplot!` not defined Stacktrace: [1] top-level scope @ interpolation.md:160 [2] eval @ ./boot.jl:385 [inlined] [3] #58 @ ~/.julia/packages/Documenter/pA5Sa/src/expander_pipeline.jl:754 [inlined] [4] cd(f::Documenter.var"#58#60"{Module, Expr}, dir::String) @ Base.Filesystem ./file.jl:112 [5] (::Documenter.var"#57#59"{Documenter.Page, Module, Expr})() @ Documenter ~/.julia/packages/Documenter/pA5Sa/src/expander_pipeline.jl:753 [6] (::IOCapture.var"#4#7"{DataType, Documenter.var"#57#59"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})() @ IOCapture ~/.julia/packages/IOCapture/Rzdxd/src/IOCapture.jl:161 [7] with_logstate(f::Function, logstate::Any) @ Base.CoreLogging ./logging.jl:515 [8] with_logger @ ./logging.jl:627 [inlined] [9] capture(f::Documenter.var"#57#59"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer) @ IOCapture ~/.julia/packages/IOCapture/Rzdxd/src/IOCapture.jl:158 [10] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document) @ Documenter ~/.julia/packages/Documenter/pA5Sa/src/expander_pipeline.jl:752

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@4d4ae6ae148a43d0fd1eda1800170683e9882738, pyTooling/Actions/with-post-step@adef08d3bdef092282614f3b683897cefae82ee3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Unexpected input(s) 'threshold', 'target', valid inputs are ['token', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'file', 'files', 'flags', 'git_service', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugin', 'plugins', 'report_code', 'root_dir', 'slug', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'verbose', 'version', 'working-directory']

Codecov: Failed to properly create commit: The process '/home/runner/work/_actions/codecov/codecov-action/v4/dist/codecov' failed with exit code 1

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/cache@4d4ae6ae148a43d0fd1eda1800170683e9882738, pyTooling/Actions/with-post-step@adef08d3bdef092282614f3b683897cefae82ee3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Unexpected input(s) 'threshold', 'target', valid inputs are ['token', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'file', 'files', 'flags', 'git_service', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugin', 'plugins', 'report_code', 'root_dir', 'slug', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'verbose', 'version', 'working-directory']

Codecov: Failed to properly create commit: The process '/home/runner/work/_actions/codecov/codecov-action/v4/dist/codecov' failed with exit code 1