diff --git a/.DS_Store b/.DS_Store index 7a464d8..93996c0 100644 Binary files a/.DS_Store and b/.DS_Store differ diff --git a/example.R b/example.R deleted file mode 100644 index f82126f..0000000 --- a/example.R +++ /dev/null @@ -1,19 +0,0 @@ -#-----------------------update package---------------------- -library(devtools) - -setwd("/Users/hazelma/Documents/GitHub") -document("MolPad") #important: generate man - - -install("MolPad") -library("MolPad") - -data("test_data") -library(shiny) #br() - -gDashboard(test_data_processed,test_cluster,test_annotations_processed,test_network, - dashboardtitle = "Test", - id_colname = c("GO_ID","KEGG_ID"),id_type = c("GO","KEGG")) - -# add readme on installation -# add screenshot for nevigation \ No newline at end of file diff --git a/generateweb.R b/generateweb.R deleted file mode 100644 index 05148cb..0000000 --- a/generateweb.R +++ /dev/null @@ -1,45 +0,0 @@ -library(pkgdown) - -pkgdown::build_site() - -# create Readme.Rmd from https://github.com/krisrs1128/mbtransfer/blob/main/Readme.Rmd -# render using rmarkdown::render() -# rebuild site - -# can customize css: https://raw.githubusercontent.com/krisrs1128/mbtransfer/main/_pkgdown.yml - -library(usethis) -use_vignette("test_vignette") -rmarkdown::render("vignettes/test_vignette.Rmd") - -setwd(paste0(getwd(),"/MolPad")) -pkgdown::build_site() - -getwd() - - -#---- - -setwd("/Users/hazelma/Documents/GitHub/MolPad") -pkgdown::build_site() -#---- - -# One time set-up with Git, Github, and Github Actions -usethis::use_git(message = "Initial commit") -usethis::use_github(private = FALSE) -usethis::use_github_action("pkgdown") -usethis::use_pkgdown_github_pages() - -# locally building site -pkgdown::build_site() - -# Install package -devtools::install_github("KaiyanM/MolPad") - -usethis::use_pkgdown_github_pages() - -pkgdown::build_site() - - -pkgdown::clean_site() -pkgdown::build_site() diff --git a/vignettes/.DS_Store b/vignettes/.DS_Store index ae02f0e..bc21539 100644 Binary files a/vignettes/.DS_Store and b/vignettes/.DS_Store differ