diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index 7ecfa8c7ea22..6825388bdc67 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -17,440 +17,60 @@ permissions: contents: read jobs: - # changed-files: - # runs-on: ubuntu-latest - # # see https://docs.github.com/en/actions/using-workflows/workflow-syntax-for-github-actions#example-defining-outputs-for-a-job - # outputs: - # files: ${{ steps.get_files.outputs.changed_files }} - # steps: - # - uses: actions/checkout@v4 - - # - id: get_files - # run: | - # echo "changed_files=$(python3 .github/get_files_changed_in_pr.py)" >> $GITHUB_OUTPUT - # env: - # GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} - # GITHUB_PR_NUMBER: ${{ github.event.pull_request.number }} - - # ubuntu: - # runs-on: ubuntu-latest - # needs: changed-files - # strategy: - # fail-fast: false - # matrix: - # build-type: [Custom, FullDebug] - # compiler: [gcc, clang] - # env: - # KRATOS_BUILD_TYPE: ${{ matrix.build-type }} - # KRATOS_CI_CHANGED_FILES: ${{needs.changed-files.outputs.files}} - # KRATOS_CI_APPLICATIONS: ".github/workflows/ci_apps_linux.json" - # KRATOS_CI_CORES: 4 # Current limits are 4 CPU and 16 GB Ram - # OMPI_MCA_rmaps_base_oversubscribe: 1 # Allow oversubscription for MPI (needed for OpenMPI >= 3.0) - # OMPI_MCA_btl_vader_single_copy_mechanism: none # Suppressing some annoying OpenMPI messages - - # container: - # image: kratosmultiphysics/kratos-image-ci-ubuntu-22-04:latest - # options: --user 1001 - - # steps: - # - uses: actions/checkout@v4 - - # - name: Installing dependencies - # => must be added to the docker container to avoid reinstalling it in every CI run - - # - name: CI configuration - # shell: bash - # run: python3 kratos/python_scripts/testing/ci_utilities.py - - # - name: Build - # shell: bash - # run: | - # if [ ${{ matrix.compiler }} = gcc ]; then - # export CC=/usr/bin/gcc-12 - # export CXX=/usr/bin/g++-12 - # export KRATOS_CMAKE_OPTIONS_FLAGS="-DUSE_EIGEN_MKL=ON -DUSE_EIGEN_FEAST=ON -DTRILINOS_EXCLUDE_AMESOS2_SOLVER=OFF" - # export KRATOS_CMAKE_CXX_FLAGS="-Werror -Wno-deprecated-declarations -Wignored-qualifiers" - # elif [ ${{ matrix.compiler }} = clang ]; then - # export CC=/usr/bin/clang-14 - # export CXX=/usr/bin/clang++-14 - # export KRATOS_CMAKE_CXX_FLAGS="-Werror -Wno-deprecated-declarations" - # export KRATOS_CMAKE_OPTIONS_FLAGS="-DTRILINOS_EXCLUDE_AMESOS2_SOLVER=OFF" - # else - # echo 'Unsupported compiler: ${{ matrix.compiler }}' - # exit 1 - # fi - # source /opt/intel/oneapi/setvars.sh - # cp .github/workflows/configure_core.sh configure.sh - # python3 kratos/python_scripts/testing/ci_utilities.py - # bash configure.sh - # rm -r ${GITHUB_WORKSPACE}/build - - # - name: Build Dependencies - # shell: bash - # run: | - # if [ ${{ matrix.compiler }} = gcc ]; then - # export CC=/usr/bin/gcc-12 - # export CXX=/usr/bin/g++-12 - # export KRATOS_CMAKE_OPTIONS_FLAGS="-DMMG_ROOT=/external_libraries/mmg/mmg_5_5_1/ -DPMMG_ROOT=/external_libraries/ParMmg_5ffc6ad -DINCLUDE_PMMG=ON" - # export KRATOS_CMAKE_CXX_FLAGS="-Werror -Wno-deprecated-declarations -Wignored-qualifiers" - # elif [ ${{ matrix.compiler }} = clang ]; then - # export CC=/usr/bin/clang-14 - # export CXX=/usr/bin/clang++-14 - # export KRATOS_CMAKE_CXX_FLAGS="-Werror -Wno-deprecated-declarations" - # export KRATOS_CMAKE_OPTIONS_FLAGS="-DMMG_ROOT=/external_libraries/mmg/mmg_5_5_1/" - # else - # echo 'Unsupported compiler: ${{ matrix.compiler }}' - # exit 1 - # fi - # source /opt/intel/oneapi/setvars.sh - # cp .github/workflows/configure_dependencies.sh configure.sh - # bash configure.sh - # rm -r ${GITHUB_WORKSPACE}/build - - # - name: Build Core Apps - # shell: bash - # run: | - # if [ ${{ matrix.compiler }} = gcc ]; then - # export CC=/usr/bin/gcc-12 - # export CXX=/usr/bin/g++-12 - # export KRATOS_CMAKE_OPTIONS_FLAGS="" - # export KRATOS_CMAKE_CXX_FLAGS="-Werror -Wno-deprecated-declarations -Wignored-qualifiers" - # elif [ ${{ matrix.compiler }} = clang ]; then - # export CC=/usr/bin/clang-14 - # export CXX=/usr/bin/clang++-14 - # export KRATOS_CMAKE_CXX_FLAGS="-Werror -Wno-deprecated-declarations" - # export KRATOS_CMAKE_OPTIONS_FLAGS="" - # else - # echo 'Unsupported compiler: ${{ matrix.compiler }}' - # exit 1 - # fi - # source /opt/intel/oneapi/setvars.sh - # cp .github/workflows/configure_core_applications.sh configure.sh - # bash configure.sh - # rm -r ${GITHUB_WORKSPACE}/build - - # - name: Build Research Apps - # shell: bash - # run: | - # if [ ${{ matrix.compiler }} = gcc ]; then - # export CC=/usr/bin/gcc-12 - # export CXX=/usr/bin/g++-12 - # export KRATOS_CMAKE_OPTIONS_FLAGS="" - # export KRATOS_CMAKE_CXX_FLAGS="-Werror -Wno-deprecated-declarations -Wignored-qualifiers" - # elif [ ${{ matrix.compiler }} = clang ]; then - # export CC=/usr/bin/clang-14 - # export CXX=/usr/bin/clang++-14 - # export KRATOS_CMAKE_CXX_FLAGS="-Werror -Wno-deprecated-declarations" - # export KRATOS_CMAKE_OPTIONS_FLAGS="" - # else - # echo 'Unsupported compiler: ${{ matrix.compiler }}' - # exit 1 - # fi - # source /opt/intel/oneapi/setvars.sh - # cp .github/workflows/configure_research_applications.sh configure.sh - # bash configure.sh - # rm -r ${GITHUB_WORKSPACE}/build - - # - name: Running C++ tests - # shell: bash - # run: | - # if [ ${{ matrix.compiler }} = gcc ]; then - # source /opt/intel/oneapi/setvars.sh - # fi - # export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin/${{ matrix.build-type }} - # export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin/${{ matrix.build-type }}/libs - # python3 kratos/python_scripts/testing/run_cpp_tests.py - - # - name: Running python tests - # shell: bash - # run: | - # if [ ${{ matrix.compiler }} = gcc ]; then - # source /opt/intel/oneapi/setvars.sh - # fi - # export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin/${{ matrix.build-type }} - # export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin/${{ matrix.build-type }}/libs - # python3 kratos/python_scripts/testing/run_python_tests.py -v 2 -l nightly -c python3 - - # - name: Prepare Parallel Env - # shell: bash - # run: | - # echo "localhost slots=2" >> ${GITHUB_WORKSPACE}/ci_hostfile - - # - name: Running MPI C++ tests (2 Cores) - # shell: bash - # timeout-minutes : 10 - # run: | - # if [ ${{ matrix.compiler }} = gcc ]; then - # source /opt/intel/oneapi/setvars.sh - # fi - # export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin/${{ matrix.build-type }} - # export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin/${{ matrix.build-type }}/libs - # python3 kratos/python_scripts/testing/run_cpp_mpi_tests.py --mpi_flags "--hostfile ${GITHUB_WORKSPACE}/ci_hostfile" -n 2 - - # - name: Running MPI C++ tests (3 Cores) - # shell: bash - # timeout-minutes : 10 - # run: | - # if [ ${{ matrix.compiler }} = gcc ]; then - # source /opt/intel/oneapi/setvars.sh - # fi - # export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin/${{ matrix.build-type }} - # export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin/${{ matrix.build-type }}/libs - # python3 kratos/python_scripts/testing/run_cpp_mpi_tests.py --mpi_flags "--hostfile ${GITHUB_WORKSPACE}/ci_hostfile" -n 3 - - # - name: Running MPI C++ tests (4 Cores) - # shell: bash - # timeout-minutes : 10 - # run: | - # if [ ${{ matrix.compiler }} = gcc ]; then - # source /opt/intel/oneapi/setvars.sh - # fi - # export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin/${{ matrix.build-type }} - # export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin/${{ matrix.build-type }}/libs - # python3 kratos/python_scripts/testing/run_cpp_mpi_tests.py --mpi_flags "--hostfile ${GITHUB_WORKSPACE}/ci_hostfile" -n 4 - - # - name: Running Python MPI tests (2 Cores) - # shell: bash - # run: | - # if [ ${{ matrix.compiler }} = gcc ]; then - # source /opt/intel/oneapi/setvars.sh - # fi - # export OMP_NUM_THREADS=1 - # export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin/${{ matrix.build-type }} - # export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin/${{ matrix.build-type }}/libs - # python3 kratos/python_scripts/testing/run_python_mpi_tests.py --mpi_flags "--hostfile ${GITHUB_WORKSPACE}/ci_hostfile" -l mpi_nightly -n 2 - - # - name: Running Python MPI tests (3 Cores) - # shell: bash - # run: | - # if [ ${{ matrix.compiler }} = gcc ]; then - # source /opt/intel/oneapi/setvars.sh - # fi - # export OMP_NUM_THREADS=1 - # export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin/${{ matrix.build-type }} - # export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin/${{ matrix.build-type }}/libs - # python3 kratos/python_scripts/testing/run_python_mpi_tests.py --mpi_flags "--hostfile ${GITHUB_WORKSPACE}/ci_hostfile" -l mpi_nightly -n 3 - - # - name: Running Python MPI tests (4 Cores) - # shell: bash - # run: | - # if [ ${{ matrix.compiler }} = gcc ]; then - # source /opt/intel/oneapi/setvars.sh - # fi - # export OMP_NUM_THREADS=1 - # export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin/${{ matrix.build-type }} - # export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin/${{ matrix.build-type }}/libs - # python3 kratos/python_scripts/testing/run_python_mpi_tests.py --mpi_flags "--hostfile ${GITHUB_WORKSPACE}/ci_hostfile" -l mpi_nightly -n 4 - - # windows: - # runs-on: windows-2022 - # needs: changed-files - # env: - # KRATOS_BUILD_TYPE: Custom - # KRATOS_CI_CHANGED_FILES: ${{needs.changed-files.outputs.files}} - # KRATOS_CI_APPLICATIONS: ".github/workflows/ci_apps_windows.json" - - # steps: - # - uses: actions/checkout@v4 - # - uses: actions/setup-python@v5 - # with: - # python-version: '3.10' - - # - name: CI configuration - # shell: bash - # run: python3 kratos/python_scripts/testing/ci_utilities.py - - # - name: Download boost - # run: | - # $url = "https://archives.boost.io/release/1.80.0/source/boost_1_80_0.tar.gz" - # (New-Object System.Net.WebClient).DownloadFile($url, "$env:TEMP\boost.tar.gz") - # 7z.exe x "$env:TEMP\boost.tar.gz" -o"$env:TEMP\boostArchive" -y | Out-Null - # 7z.exe x "$env:TEMP\boostArchive" -o"$env:TEMP\boost" -y | Out-Null - - # - name: Installing dependencies - # shell: cmd - # run: | - # pip install numpy - # pip install sympy - # pip install scipy - # pip install h5py - # pip install parameterized - - # - name: Build - # shell: cmd - # run: | - # copy .\.github\workflows\configure.cmd - # python kratos/python_scripts/testing/ci_utilities.py - # configure.cmd - - # - name: Running C++ tests - # shell: cmd - # run: | - # set PYTHONPATH=%PYTHONPATH%;%GITHUB_WORKSPACE%/bin/%KRATOS_BUILD_TYPE% - # set PATH=%PATH%;%GITHUB_WORKSPACE%/bin/%KRATOS_BUILD_TYPE%/libs - # python kratos/python_scripts/testing/run_cpp_tests.py - - # - name: Running python tests - # shell: cmd - # run: | - # set PYTHONPATH=%PYTHONPATH%;%GITHUB_WORKSPACE%/bin/%KRATOS_BUILD_TYPE% - # set PATH=%PATH%;%GITHUB_WORKSPACE%/bin/%KRATOS_BUILD_TYPE%/libs - # python kratos/python_scripts/testing/run_python_tests.py -v 2 -l nightly -c python - - # centos: - # runs-on: ubuntu-latest - # needs: changed-files - # env: - # KRATOS_BUILD_TYPE: Custom - # KRATOS_CI_CHANGED_FILES: ${{needs.changed-files.outputs.files}} - # KRATOS_CI_APPLICATIONS: ".github/workflows/ci_apps_centos.json" - # ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION: true - - # container: - # image: kratosmultiphysics/kratos-image-ci-centos7:latest - # options: --user 1001 - - # steps: - # - uses: actions/checkout@v3 - - # # - name: Installing dependencies - # # => must be added to the docker container to avoid reinstalling it in every CI run - - # - name: CI configuration - # shell: bash - # run: python3.8 kratos/python_scripts/testing/ci_utilities.py - - # - name: Build - # run: | - # export KRATOS_CMAKE_CXX_FLAGS="-Werror -Wno-deprecated-declarations -Wignored-qualifiers" - # cp .github/workflows/centos_configure.sh centos_configure.sh - # bash centos_configure.sh - - # - name: Running C++ tests - # run: | - # export PYTHONPATH=${GITHUB_WORKSPACE}/bin/Custom - # export LD_LIBRARY_PATH=${GITHUB_WORKSPACE}/bin/Custom/libs - # python3.8 kratos/python_scripts/testing/run_cpp_tests.py - - # - name: Running python tests - # run: | - # export PYTHONPATH=${GITHUB_WORKSPACE}/bin/Custom - # export LD_LIBRARY_PATH=${GITHUB_WORKSPACE}/bin/Custom/libs - # python3.8 kratos/python_scripts/testing/run_python_tests.py -l nightly -c python3.8 - - - # ubuntu-core-without-unity: - # runs-on: ubuntu-latest - # needs: changed-files - # env: - # KRATOS_BUILD_TYPE: Custom - # KRATOS_CI_CHANGED_FILES: ${{needs.changed-files.outputs.files}} - # KRATOS_CI_APPLICATIONS: "ONLY_CORE" - # OMPI_MCA_rmaps_base_oversubscribe: 1 # Allow oversubscription for MPI (needed for OpenMPI >= 3.0) - - # container: - # image: kratosmultiphysics/kratos-image-ci-ubuntu-22-04:latest - # options: --user 1001 - - # steps: - # - uses: actions/checkout@v4 - - # - name: CI configuration - # shell: bash - # run: python3 kratos/python_scripts/testing/ci_utilities.py - - # - name: Build - # shell: bash - # run: | - # export CC=/usr/bin/clang-14 - # export CXX=/usr/bin/clang++-14 - - # export KRATOS_SOURCE="${KRATOS_SOURCE:-${PWD}}" - # export KRATOS_BUILD="${KRATOS_SOURCE}/build" - # export KRATOS_APP_DIR="${KRATOS_SOURCE}/applications" - # export PYTHON_EXECUTABLE="/usr/bin/python3" - # export KRATOS_INSTALL_PYTHON_USING_LINKS=ON - - # add_app () { - # export KRATOS_APPLICATIONS="${KRATOS_APPLICATIONS}$1;" - # } - - # add_app ${KRATOS_APP_DIR}/LinearSolversApplication; - # add_app ${KRATOS_APP_DIR}/MetisApplication; - # add_app ${KRATOS_APP_DIR}/TrilinosApplication; - - # source /opt/intel/oneapi/setvars.sh - - # # Configure - # cmake -H"${KRATOS_SOURCE}" -B"${KRATOS_BUILD}/${KRATOS_BUILD_TYPE}" \ - # -DUSE_MPI=ON \ - # -DTRILINOS_INCLUDE_DIR="/usr/include/trilinos" \ - # -DTRILINOS_LIBRARY_DIR="/usr/lib/x86_64-linux-gnu" \ - # -DTRILINOS_LIBRARY_PREFIX="trilinos_" \ - # -DKRATOS_USE_PCH=ON - - # # Build - # # Please do not use more than 2 cores or it will produce an out of heap memory error - # cmake --build "${KRATOS_BUILD}/${KRATOS_BUILD_TYPE}" --target install -- -j2 - - # - name: Running C++ tests - # shell: bash - # run: | - # export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin/Custom - # export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin/Custom/libs - # python3 kratos/python_scripts/testing/run_cpp_tests.py + windows: + runs-on: windows-2022 + needs: changed-files + env: + KRATOS_BUILD_TYPE: Custom + KRATOS_CI_CHANGED_FILES: ${{needs.changed-files.outputs.files}} + KRATOS_CI_APPLICATIONS: ".github/workflows/ci_apps_windows.json" - # - name: Running python tests - # shell: bash - # run: | - # export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin/Custom - # export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin/Custom/libs - # python3 kratos/python_scripts/testing/run_python_tests.py -l nightly -c python3 + steps: + - uses: actions/checkout@v4 + - uses: actions/setup-python@v5 + with: + python-version: '3.10' - # - name: Running MPI C++ tests (2 Cores) - # shell: bash - # timeout-minutes : 10 - # run: | - # export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin/Custom - # export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin/Custom/libs - # python3 kratos/python_scripts/testing/run_cpp_mpi_tests.py -n 2 + - name: CI configuration + shell: bash + run: python3 kratos/python_scripts/testing/ci_utilities.py - # - name: Running MPI C++ tests (3 Cores) - # shell: bash - # timeout-minutes : 10 - # run: | - # export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin/Custom - # export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin/Custom/libs - # python3 kratos/python_scripts/testing/run_cpp_mpi_tests.py -n 3 + - name: Download boost + run: | + $url = "https://archives.boost.io/release/1.80.0/source/boost_1_80_0.tar.gz" + (New-Object System.Net.WebClient).DownloadFile($url, "$env:TEMP\boost.tar.gz") + 7z.exe x "$env:TEMP\boost.tar.gz" -o"$env:TEMP\boostArchive" -y | Out-Null + 7z.exe x "$env:TEMP\boostArchive" -o"$env:TEMP\boost" -y | Out-Null - # - name: Running MPI C++ tests (4 Cores) - # shell: bash - # timeout-minutes : 10 - # run: | - # export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin/Custom - # export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin/Custom/libs - # python3 kratos/python_scripts/testing/run_cpp_mpi_tests.py -n 4 + - name: Installing dependencies + shell: cmd + run: | + pip install numpy + pip install sympy + pip install scipy + pip install h5py + pip install parameterized - # - name: Running Python MPI tests (2 Cores) - # shell: bash - # run: | - # export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin/Custom - # export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin/Custom/libs - # python3 kratos/python_scripts/testing/run_python_mpi_tests.py -l mpi_nightly -n 2 + - name: Build + shell: cmd + run: | + copy .\.github\workflows\configure.cmd + python kratos/python_scripts/testing/ci_utilities.py + configure.cmd - # - name: Running Python MPI tests (3 Cores) - # shell: bash - # run: | - # export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin/Custom - # export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin/Custom/libs - # python3 kratos/python_scripts/testing/run_python_mpi_tests.py -l mpi_nightly -n 3 + - name: Running C++ tests + shell: cmd + run: | + set PYTHONPATH=%PYTHONPATH%;%GITHUB_WORKSPACE%/bin/%KRATOS_BUILD_TYPE% + set PATH=%PATH%;%GITHUB_WORKSPACE%/bin/%KRATOS_BUILD_TYPE%/libs + python kratos/python_scripts/testing/run_cpp_tests.py - # - name: Running Python MPI tests (4 Cores) - # shell: bash - # run: | - # export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin/Custom - # export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin/Custom/libs - # python3 kratos/python_scripts/testing/run_python_mpi_tests.py -l mpi_nightly -n 4 + - name: Running python tests + shell: cmd + run: | + set PYTHONPATH=%PYTHONPATH%;%GITHUB_WORKSPACE%/bin/%KRATOS_BUILD_TYPE% + set PATH=%PATH%;%GITHUB_WORKSPACE%/bin/%KRATOS_BUILD_TYPE%/libs + python kratos/python_scripts/testing/run_python_tests.py -v 2 -l nightly -c python windows-core-without-unity: runs-on: windows-2022 @@ -533,212 +153,4 @@ jobs: run: | set PYTHONPATH=%PYTHONPATH%;%GITHUB_WORKSPACE%/bin/%KRATOS_BUILD_TYPE% set PATH=%PATH%;%GITHUB_WORKSPACE%/bin/%KRATOS_BUILD_TYPE%/libs - python kratos/python_scripts/testing/run_python_tests.py -v 2 -l nightly -c python - - - # ubuntu-intel-legacy: - # runs-on: ubuntu-latest - # env: - # KRATOS_BUILD_TYPE: Custom - # OMPI_MCA_rmaps_base_oversubscribe: 1 # Allow oversubscription for MPI (needed for OpenMPI >= 3.0) - # OMPI_MCA_btl_vader_single_copy_mechanism: none # suppressing some annoying OpenMPI messages - # OMPI_ALLOW_RUN_AS_ROOT: 1 # required since for now running as root - # OMPI_ALLOW_RUN_AS_ROOT_CONFIRM: 1 # required since for now running as root - - # container: - # image: kratosmultiphysics/kratos-image-ci-ubuntu-22-04:latest - # # options: --user 1001 # must run as root to install the intel compiler - - # steps: - # - uses: actions/checkout@v4 - - # # - name: Installing dependencies - # # => must be added to the docker container to avoid reinstalling it in every CI run - - # - name: Install intel compiler - # shell: bash - # run: sudo apt-get install -y --no-install-recommends intel-oneapi-compiler-dpcpp-cpp-and-cpp-classic - - # - name: Build - # shell: bash - # run: | - # export CC=icc - # export CXX=icpc - # source /opt/intel/oneapi/setvars.sh - # cp .github/workflows/intel_configure.sh configure.sh - # bash configure.sh - - # - name: Running C++ tests - # shell: bash - # run: | - # source /opt/intel/oneapi/setvars.sh - # export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin/Custom - # export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin/Custom/libs - # python3 kratos/python_scripts/testing/run_cpp_tests.py - - # - name: Running python tests - # shell: bash - # run: | - # source /opt/intel/oneapi/setvars.sh - # export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin/Custom - # export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin/Custom/libs - # python3 kratos/python_scripts/testing/run_python_tests.py -l nightly -c python3 - - # - name: Running MPI C++ tests (2 Cores) - # shell: bash - # timeout-minutes : 10 - # run: | - # export PYTHONPATH= - # export LD_LIBRARY_PATH= - # source /opt/intel/oneapi/setvars.sh - # export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin/Custom - # export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin/Custom/libs - # python3 kratos/python_scripts/testing/run_cpp_mpi_tests.py -n 2 - - # - name: Running MPI C++ tests (3 Cores) - # shell: bash - # timeout-minutes : 10 - # run: | - # source /opt/intel/oneapi/setvars.sh - # export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin/Custom - # export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin/Custom/libs - # python3 kratos/python_scripts/testing/run_cpp_mpi_tests.py -n 3 - - # - name: Running MPI C++ tests (4 Cores) - # shell: bash - # timeout-minutes : 10 - # run: | - # source /opt/intel/oneapi/setvars.sh - # export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin/Custom - # export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin/Custom/libs - # python3 kratos/python_scripts/testing/run_cpp_mpi_tests.py -n 4 - - # - name: Running Python MPI tests (2 Cores) - # shell: bash - # run: | - # source /opt/intel/oneapi/setvars.sh - # export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin/Custom - # export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin/Custom/libs - # python3 kratos/python_scripts/testing/run_python_mpi_tests.py -l mpi_nightly -n 2 - - # - name: Running Python MPI tests (3 Cores) - # shell: bash - # run: | - # source /opt/intel/oneapi/setvars.sh - # export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin/Custom - # export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin/Custom/libs - # python3 kratos/python_scripts/testing/run_python_mpi_tests.py -l mpi_nightly -n 3 - - # - name: Running Python MPI tests (4 Cores) - # shell: bash - # run: | - # source /opt/intel/oneapi/setvars.sh - # export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin/Custom - # export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin/Custom/libs - # python3 kratos/python_scripts/testing/run_python_mpi_tests.py -l mpi_nightly -n 4 - - - # ubuntu-intel: - # runs-on: ubuntu-latest - # needs: changed-files - # env: - # KRATOS_BUILD_TYPE: Custom - # KRATOS_CI_CHANGED_FILES: ${{needs.changed-files.outputs.files}} - # KRATOS_CI_APPLICATIONS: ".github/workflows/ci_apps_intel.json" - # OMPI_MCA_rmaps_base_oversubscribe: 1 # Allow oversubscription for MPI (needed for OpenMPI >= 3.0) - # OMPI_MCA_btl_vader_single_copy_mechanism: none # suppressing some annoying OpenMPI messages - - # container: - # image: kratosmultiphysics/kratos-image-ci-ubuntu-22-04:latest - # options: --user 1001 - - # steps: - # - uses: actions/checkout@v4 - - # # - name: Installing dependencies - # # => must be added to the docker container to avoid reinstalling it in every CI run - - # - name: CI configuration - # shell: bash - # run: python3 kratos/python_scripts/testing/ci_utilities.py - - # - name: Build - # shell: bash - # run: | - # export CC=icx - # export CXX=icpx - # source /opt/intel/oneapi/setvars.sh - # cp .github/workflows/intel_configure.sh configure.sh - # bash configure.sh - - # - name: Running C++ tests - # shell: bash - # continue-on-error: true # TODO segfaults in cpp-tests - # run: | - # source /opt/intel/oneapi/setvars.sh - # export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin/Custom - # export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin/Custom/libs - # python3 kratos/python_scripts/testing/run_cpp_tests.py - - # - name: Running python tests - # shell: bash - # continue-on-error: true # TODO segfaults in cpp-tests - # run: | - # source /opt/intel/oneapi/setvars.sh - # export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin/Custom - # export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin/Custom/libs - # python3 kratos/python_scripts/testing/run_python_tests.py -l nightly -c python3 - - # - name: Running MPI C++ tests (2 Cores) - # shell: bash - # timeout-minutes : 10 - # run: | - # source /opt/intel/oneapi/setvars.sh - # export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin/Custom - # export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin/Custom/libs - # python3 kratos/python_scripts/testing/run_cpp_mpi_tests.py -n 2 - - # - name: Running MPI C++ tests (3 Cores) - # shell: bash - # timeout-minutes : 10 - # run: | - # source /opt/intel/oneapi/setvars.sh - # export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin/Custom - # export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin/Custom/libs - # python3 kratos/python_scripts/testing/run_cpp_mpi_tests.py -n 3 - - # - name: Running MPI C++ tests (4 Cores) - # shell: bash - # timeout-minutes : 10 - # run: | - # source /opt/intel/oneapi/setvars.sh - # export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin/Custom - # export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin/Custom/libs - # python3 kratos/python_scripts/testing/run_cpp_mpi_tests.py -n 4 - - # - name: Running Python MPI tests (2 Cores) - # shell: bash - # run: | - # source /opt/intel/oneapi/setvars.sh - # export OMP_NUM_THREADS=1 - # export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin/Custom - # export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin/Custom/libs - # python3 kratos/python_scripts/testing/run_python_mpi_tests.py -l mpi_nightly -n 2 - - # - name: Running Python MPI tests (3 Cores) - # shell: bash - # run: | - # source /opt/intel/oneapi/setvars.sh - # export OMP_NUM_THREADS=1 - # export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin/Custom - # export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin/Custom/libs - # python3 kratos/python_scripts/testing/run_python_mpi_tests.py -l mpi_nightly -n 3 - - # - name: Running Python MPI tests (4 Cores) - # shell: bash - # run: | - # source /opt/intel/oneapi/setvars.sh - # export OMP_NUM_THREADS=1 - # export PYTHONPATH=${PYTHONPATH}:${GITHUB_WORKSPACE}/bin/Custom - # export LD_LIBRARY_PATH=${LD_LIBRARY_PATH}:${GITHUB_WORKSPACE}/bin/Custom/libs - # python3 kratos/python_scripts/testing/run_python_mpi_tests.py -l mpi_nightly -n 4 \ No newline at end of file + python kratos/python_scripts/testing/run_python_tests.py -v 2 -l nightly -c python \ No newline at end of file