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hbp.yml
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hbp.yml
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description: "Base Docker image to manage installation of research-grade datasets providing features to ML algorithms"
long_description: |
This Docker image manages the database migration scripts for the research-grade data tables used by MIP.
The research-grade data tables contain the following types of data\:
* the features (values) for each Common Data Elements (CDE) defined by MIP.
* the features extracted from research datasets (ADNI, PPMI...)
* the features extracted from clinical data
authors:
- author: Ludovic Claude
author_email:
organisation: LREN-CHUV
organisation_badge: https://img.shields.io/badge/CHUV-LREN-AF4C64.svg
platform: MIP
component:
mip_building_block: reference
nature: docker-image
license:
name: Apache 2.0
badge: https://img.shields.io/badge/license-Apache--2.0-blue.svg
url: https://github.com/LREN-CHUV/data-db-setup/blob/master/LICENSE
code_repositories:
- name: chuv-gitlab/HBPMedical
visibility: private
url: https://___.chuv.ch/data-factory/data-db-setup/
git_clone: https://___.chuv.ch/data-factory/data-db-setup.git
- name: github/LREN-CHUV
visibility: public
url: https://github.io/LREN-CHUV/data-db-setup/
git_clone: https://github.io/LREN-CHUV/data-db-setup.git
- name: github/HBPMedical
visibility: public
url: https://github.io/HBPMedical/data-db-setup/
git_clone: https://github.io/HBPMedical/data-db-setup.git
code_quality_checks:
codacy:
badge: https://api.codacy.com/project/badge/Grade/fb70732c6b7647699610bdb7be1d8548
url: "https://www.codacy.com/app/hbp-mip/data-db-setup?utm_source=github.com&utm_medium=referral&utm_content=LREN-CHUV/data-db-setup&utm_campaign=Badge_Grade"
testing:
unit_testing:
sources: ./tests
command: ./tests/tesh.sh
release_management:
current_version: 2.6.1
current_code_release: https://github.com/HBPMedical/data-db-setup/archive/2.6.1.zip
current_docker_release: docker pull hbpmip/data-db-setup:2.6.1
release_script: 'publish.sh'
continuous_integration:
- name: CircleCI
description: "Check style and execute unit tests"
url: https://circleci.com/gh/LREN-CHUV/data-db-setup
badge: https://circleci.com/gh/LREN-CHUV/data-db-setup.svg?style=svg
actions:
- code_style
- unit_tests
distribution:
docker_hub:
name: hbpmip/data-db-setup
current_tag: 2.6.1
url: https://hub.docker.com/r/hbpmip/data-db-setup/
badge: https://img.shields.io/badge/docker-hbpmip%2Fdata--db--setup-008bb8.svg
command: docker pull hbpmip/data-db-setup:2.6.1
planning:
github:
name: Issues on Github
url: https://github.com/LREN-CHUV/data-db-setup/issues
related_projects:
- name: meta-db-setup
mip_building_block: reference
relationship: see-also
- name: mip-cde-data-db-setup
mip_building_block: reference
relationship: other-depends-on