From b29cb7f43bcbd09cfd4aec055c420e90d18c93ae Mon Sep 17 00:00:00 2001 From: JJTimmons Date: Wed, 29 Jan 2020 15:55:48 -0500 Subject: [PATCH] Fix features docs - it said `repp builde features`.. it should be `repp make features` --- cmd/set.go | 2 +- docs/repp.md | 2 +- docs/repp_annotate.md | 2 +- docs/repp_delete.md | 2 +- docs/repp_delete_feature.md | 2 +- docs/repp_find.md | 2 +- docs/repp_find_enzyme.md | 2 +- docs/repp_find_feature.md | 2 +- docs/repp_find_fragment.md | 2 +- docs/repp_find_sequence.md | 2 +- docs/repp_make.md | 2 +- docs/repp_make_features.md | 2 +- docs/repp_make_fragments.md | 2 +- docs/repp_make_sequence.md | 2 +- docs/repp_set.md | 2 +- docs/repp_set_enzyme.md | 2 +- docs/repp_set_feature.md | 4 ++-- 17 files changed, 18 insertions(+), 18 deletions(-) diff --git a/cmd/set.go b/cmd/set.go index e735565ba..236225cb2 100644 --- a/cmd/set.go +++ b/cmd/set.go @@ -22,7 +22,7 @@ var featureCreateCmd = &cobra.Command{ Short: "Add a feature to the features database", Run: featureDB.SetCmd, SuggestionsMinimumDistance: 2, - Long: "\nSet a feature in the features database so it can be use used in 'repp builde features'", + Long: "\nSet a feature in the features database so it can be use used in 'repp make features'", Aliases: []string{"add", "update"}, Example: " repp set feature \"custom terminator 3\" CTAGCATAACAAGCTTGGGCACCTGTAAACGGGTCTTGAGGGGTTCCATTTTG", } diff --git a/docs/repp.md b/docs/repp.md index c6d770820..fc2aa0f03 100644 --- a/docs/repp.md +++ b/docs/repp.md @@ -33,4 +33,4 @@ their sequence, features, or fragments * [repp make](repp_make) - Make a plasmid from its expected sequence, features or fragments * [repp set](repp_set) - Set a feature or enzyme -###### Auto generated by spf13/cobra on 21-Jan-2020 +###### Auto generated by spf13/cobra on 29-Jan-2020 diff --git a/docs/repp_annotate.md b/docs/repp_annotate.md index 0dd1ae01c..428cbdcd9 100644 --- a/docs/repp_annotate.md +++ b/docs/repp_annotate.md @@ -46,4 +46,4 @@ repp annotate [seq] [flags] Repository-based plasmid design. Specify and build plasmids using their sequence, features, or fragments -###### Auto generated by spf13/cobra on 21-Jan-2020 +###### Auto generated by spf13/cobra on 29-Jan-2020 diff --git a/docs/repp_delete.md b/docs/repp_delete.md index c3f555d99..78ca5b2a3 100644 --- a/docs/repp_delete.md +++ b/docs/repp_delete.md @@ -27,4 +27,4 @@ Repository-based plasmid design. Specify and build plasmids using their sequence, features, or fragments * [repp delete feature](repp_delete_feature) - Delete a feature from the features database -###### Auto generated by spf13/cobra on 21-Jan-2020 +###### Auto generated by spf13/cobra on 29-Jan-2020 diff --git a/docs/repp_delete_feature.md b/docs/repp_delete_feature.md index 5fc939e9d..cd74d3274 100644 --- a/docs/repp_delete_feature.md +++ b/docs/repp_delete_feature.md @@ -34,4 +34,4 @@ repp delete feature [name] [flags] * [repp delete](repp_delete) - Delete a feature -###### Auto generated by spf13/cobra on 21-Jan-2020 +###### Auto generated by spf13/cobra on 29-Jan-2020 diff --git a/docs/repp_find.md b/docs/repp_find.md index 44f5d0d7f..99af49f73 100644 --- a/docs/repp_find.md +++ b/docs/repp_find.md @@ -31,4 +31,4 @@ their sequence, features, or fragments * [repp find fragment](repp_find_fragment) - Find a fragment in the databases * [repp find sequence](repp_find_sequence) - Find a sequence in the databases -###### Auto generated by spf13/cobra on 21-Jan-2020 +###### Auto generated by spf13/cobra on 29-Jan-2020 diff --git a/docs/repp_find_enzyme.md b/docs/repp_find_enzyme.md index 4a6bcf985..44d272638 100644 --- a/docs/repp_find_enzyme.md +++ b/docs/repp_find_enzyme.md @@ -35,4 +35,4 @@ repp find enzyme [name] [flags] * [repp find](repp_find) - Find features or enzymes -###### Auto generated by spf13/cobra on 21-Jan-2020 +###### Auto generated by spf13/cobra on 29-Jan-2020 diff --git a/docs/repp_find_feature.md b/docs/repp_find_feature.md index 5171bfa2e..144ec9e62 100644 --- a/docs/repp_find_feature.md +++ b/docs/repp_find_feature.md @@ -37,4 +37,4 @@ repp find feature [name] [flags] * [repp find](repp_find) - Find features or enzymes -###### Auto generated by spf13/cobra on 21-Jan-2020 +###### Auto generated by spf13/cobra on 29-Jan-2020 diff --git a/docs/repp_find_fragment.md b/docs/repp_find_fragment.md index 107a0ab94..46eff86b4 100644 --- a/docs/repp_find_fragment.md +++ b/docs/repp_find_fragment.md @@ -37,4 +37,4 @@ repp find fragment [name] [flags] * [repp find](repp_find) - Find features or enzymes -###### Auto generated by spf13/cobra on 21-Jan-2020 +###### Auto generated by spf13/cobra on 29-Jan-2020 diff --git a/docs/repp_find_sequence.md b/docs/repp_find_sequence.md index e552623ed..b7cb33910 100644 --- a/docs/repp_find_sequence.md +++ b/docs/repp_find_sequence.md @@ -39,4 +39,4 @@ repp find sequence [seq] [flags] * [repp find](repp_find) - Find features or enzymes -###### Auto generated by spf13/cobra on 21-Jan-2020 +###### Auto generated by spf13/cobra on 29-Jan-2020 diff --git a/docs/repp_make.md b/docs/repp_make.md index 1039921a7..86658ce39 100644 --- a/docs/repp_make.md +++ b/docs/repp_make.md @@ -32,4 +32,4 @@ their sequence, features, or fragments * [repp make fragments](repp_make_fragments) - Build a plasmid from its constituent fragments * [repp make sequence](repp_make_sequence) - Find or build a plasmid from its target sequence -###### Auto generated by spf13/cobra on 21-Jan-2020 +###### Auto generated by spf13/cobra on 29-Jan-2020 diff --git a/docs/repp_make_features.md b/docs/repp_make_features.md index 081b68fca..7a96ee26c 100644 --- a/docs/repp_make_features.md +++ b/docs/repp_make_features.md @@ -52,4 +52,4 @@ repp make features "BBa_R0062,BBa_B0034,BBa_C0040,BBa_B0010,BBa_B0012" --backbon * [repp make](repp_make) - Make a plasmid from its expected sequence, features or fragments -###### Auto generated by spf13/cobra on 21-Jan-2020 +###### Auto generated by spf13/cobra on 29-Jan-2020 diff --git a/docs/repp_make_fragments.md b/docs/repp_make_fragments.md index 779bc22a4..48d12a0c3 100644 --- a/docs/repp_make_fragments.md +++ b/docs/repp_make_fragments.md @@ -47,4 +47,4 @@ repp make fragments [flags] * [repp make](repp_make) - Make a plasmid from its expected sequence, features or fragments -###### Auto generated by spf13/cobra on 21-Jan-2020 +###### Auto generated by spf13/cobra on 29-Jan-2020 diff --git a/docs/repp_make_sequence.md b/docs/repp_make_sequence.md index 009d403b9..de8cffb4f 100644 --- a/docs/repp_make_sequence.md +++ b/docs/repp_make_sequence.md @@ -56,4 +56,4 @@ repp make sequence -i "./target_plasmid.fa --addgene --dbs "part_library.fa" * [repp make](repp_make) - Make a plasmid from its expected sequence, features or fragments -###### Auto generated by spf13/cobra on 21-Jan-2020 +###### Auto generated by spf13/cobra on 29-Jan-2020 diff --git a/docs/repp_set.md b/docs/repp_set.md index 82e1ce086..497b93f80 100644 --- a/docs/repp_set.md +++ b/docs/repp_set.md @@ -30,4 +30,4 @@ their sequence, features, or fragments * [repp set enzyme](repp_set_enzyme) - Add an enzyme to the enzymes database * [repp set feature](repp_set_feature) - Add a feature to the features database -###### Auto generated by spf13/cobra on 21-Jan-2020 +###### Auto generated by spf13/cobra on 29-Jan-2020 diff --git a/docs/repp_set_enzyme.md b/docs/repp_set_enzyme.md index c4b3c1246..c7b18db78 100644 --- a/docs/repp_set_enzyme.md +++ b/docs/repp_set_enzyme.md @@ -38,4 +38,4 @@ repp set enzyme [name] [sequence] [flags] * [repp set](repp_set) - Set a feature or enzyme -###### Auto generated by spf13/cobra on 21-Jan-2020 +###### Auto generated by spf13/cobra on 29-Jan-2020 diff --git a/docs/repp_set_feature.md b/docs/repp_set_feature.md index a19bc5bc0..237078e69 100644 --- a/docs/repp_set_feature.md +++ b/docs/repp_set_feature.md @@ -12,7 +12,7 @@ Add a feature to the features database ### Synopsis -Set a feature in the features database so it can be use used in 'repp builde features' +Set a feature in the features database so it can be use used in 'repp make features' ``` repp set feature [name] [sequence] [flags] @@ -34,4 +34,4 @@ repp set feature [name] [sequence] [flags] * [repp set](repp_set) - Set a feature or enzyme -###### Auto generated by spf13/cobra on 21-Jan-2020 +###### Auto generated by spf13/cobra on 29-Jan-2020