ci_checks.yml

name: ci_checks

on: [push]

jobs:
  unit-tests:
    runs-on: ubuntu-latest
    strategy:
      matrix:
        python-version: [3.8]
    steps:
    - name: Checkout repo and submodules
      uses: actions/checkout@v2
      with:
        submodules: recursive
    - name: Set up Python ${{ matrix.python-version }}
      uses: actions/setup-python@v2
      with:
        python-version: ${{ matrix.python-version }}
    - run: |  # Unit tests require lisdf-models
        pip install -e .[develop]
        pip install lisdf_models@git+https://github.com/Learning-and-Intelligent-Systems/lisdf-models.git
    - name: Pytest
      run: |
        # Note tests/ directory is not included in coverage
        pytest -s tests/ --cov-config=.coveragerc --cov=lisdf/ --cov-fail-under=75 --cov-report=term-missing:skip-covered
  static-type-checking:
    runs-on: ubuntu-latest
    strategy:
      matrix:
        python-version: [3.8]
    steps:
    - uses: actions/checkout@v2
    - name: Set up Python ${{ matrix.python-version }}
      uses: actions/setup-python@v2
      with:
        python-version: ${{ matrix.python-version }}
    - name: Install dependencies
      run: |  # mypy needs lisdf-models for lisdf/parsing/parse_sdf.py
        pip install -e .[develop]
        pip install lisdf_models@git+https://github.com/Learning-and-Intelligent-Systems/lisdf-models.git
    - name: Mypy
      run: |
        mypy . --config-file mypy.ini
  lint:
    runs-on: ubuntu-latest
    strategy:
      matrix:
        python-version: [3.8]
    steps:
    - uses: actions/checkout@v2
    - name: Set up Python ${{ matrix.python-version }}
      uses: actions/setup-python@v2
      with:
        python-version: ${{ matrix.python-version }}
    - name: Install dependencies
      run: |
        pip install -e .[develop]
    - name: Flake8
      run: |
        flake8
  autoformat:
    runs-on: ubuntu-latest
    strategy:
      matrix:
        python-version: [3.8]
    steps:
    - uses: actions/checkout@v2
    - name: Set up Python ${{ matrix.python-version }}
      uses: actions/setup-python@v2
      with:
        python-version: ${{ matrix.python-version }}
    - name: Run isort to organize imports
      uses: isort/isort-action@master
    - name: Run black to check code formatting
      uses: psf/black@stable