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The combined tissue_positions.csv file lacks updated array_row and array_col coordinates, but the spe does. Having old/original array coordinates and new/updated pixel coordinates in the same file is confusing.
Expected behaviour
For people who need only updated array and pixel coordinates, it's easier to pull these csv's instead of saving and extracting them from the stitched spe.
The text was updated successfully, but these errors were encountered:
madhavitippani
changed the title
Combined CSV file save updated array_row and array_col coordinates
Combined tissue_positions CSV file doesnt save updated array_row and array_col coordinates
Sep 23, 2024
Describe the bug
The combined tissue_positions.csv file lacks updated array_row and array_col coordinates, but the spe does. Having old/original array coordinates and new/updated pixel coordinates in the same file is confusing.
Expected behaviour
For people who need only updated array and pixel coordinates, it's easier to pull these csv's instead of saving and extracting them from the stitched spe.
The text was updated successfully, but these errors were encountered: