Skip to content

Issues: MDAnalysis/UserGuide

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Clear current search query, filters, and sorts
59 Open 122 Closed
59 Open 122 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

BAT-Cartesian converter
#154 opened Jun 3, 2021 by lilyminium Release 2.0
Salt bridge analysis analysis For analysis modules notebook Has notebooks associated
#42 opened Feb 13, 2020 by lilyminium
1
Add information to "Contributing"
#44 opened Feb 17, 2020 by lilyminium
1 of 4 tasks
@lilyminium
Document lib module
#48 opened Feb 23, 2020 by lilyminium
Developer guide
#94 opened Jul 15, 2020 by lilyminium
3
PDF version of user guide looks weird
#136 opened Mar 5, 2021 by lilyminium
MDA on Colab example
#137 opened Apr 2, 2021 by IAlibay
2
Bfactors now an alias of tempfactors
#148 opened Jun 3, 2021 by lilyminium Release 2.0
Update TPRParser to include keyword tpr_resid_from_one and index from 1 outreachy-task
#149 opened Jun 3, 2021 by lilyminium Release 2.0
1
AtomGroups are now un/pickled without anchor universes
#150 opened Jun 3, 2021 by lilyminium Release 2.0
Document Results
#151 opened Jun 3, 2021 by lilyminium Release 2.0
Automatic Selection class generation
#152 opened Jun 3, 2021 by lilyminium Release 2.0
Writing out AtomGroups atomgroup Relates to AtomGroups selection
#8 opened Aug 31, 2019 by lilyminium
4 of 5 tasks
Input/output options
@lilyminium
3
New selection operators
#153 opened Jun 3, 2021 by lilyminium Release 2.0
Pickling
#155 opened Jun 3, 2021 by lilyminium Release 2.0
1
Added TransformationBase
#156 opened Jun 3, 2021 by lilyminium Release 2.0
Check installation dependencies
#157 opened Jun 3, 2021 by lilyminium Release 2.0
OpenMM tutorial
#158 opened Jun 3, 2021 by lilyminium Release 2.0
Document get_connections and intra_bonds
#159 opened Jun 3, 2021 by lilyminium Release 2.0
Run Jupyter notebooks during build
#163 opened Jun 20, 2021 by lilyminium
Document for selection with canonical attributes outreachy-task
#170 opened Sep 23, 2021 by yuxuanzhuang
1
Recommend assert_allclose instead of assert_almost_equal outreachy-task
#171 opened Sep 24, 2021 by IAlibay
1
Update style docs for list parameters outreachy-task
#181 opened Jan 2, 2022 by PicoCentauri
6
Update supported TPR versions outreachy-task
#191 opened Mar 29, 2022 by lilyminium
3
installation instructions suggest incorrect mamba installation defect bug installation Installation instructions
#405 opened Feb 28, 2025 by orbeckst
ProTip! What’s not been updated in a month: updated:<2025-01-28.