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Multi-echo fMRI: OHBM 2021

This contains materials related to tedana and multi-echo fMRI presented at the Organization for Human Brain Mapping 2021


Open Science Room Emergent Session: Multi-echo fMRI in practice

Multi-echo fMRI is an acquisition method where data is acquired at multiple echo times after each excitation pulse. This information can be used to reduce signal dropout and quantitatively identify and remove signal that is unlikely to be neural in origin. Multi-echo fMRI acquisition and processing methods have sufficiently matured to the point where the growing developer and user community would benefit from a discussion of what it’s like to use multi-echo fMRI in practice. In this emergent session, presenters will briefly answer three questions: (1) Why are you using multi-echo fMRI? (2) Are there any challenges of multi-echo fMRI that you’ve addressed and want to highlight? (3) What issue(s) with multi-echo fMRI would you like to see addressed? These presentations will be followed by time for discussion between presenters and attendees.

This session was organized by people who are part of the tedana project, but we want and welcome presenters who don't work on tedana. We're allowed 4 presenters total. If you are interested in presenting in this session or have thoughts for how to organize the session, please contact Dan Handwerker directly or comment on issue #1.


Multi-echo posters and presentations

This is a place to centralize multi-echo related content at OHBM 2021. If you see or have a poster or presentation using multi-echo fMRI, submit a pull request or comment on this issue #2 to have it added.

1421 tedana: Multi-echo fMRI tools and resources

Tedana Community: Zaki Ahmed, Peter Bandettini, Katherine Bottenhorn, César Caballero-Gaudes, Logan Dowdle, Elizabeth DuPre,Javier Gonzalez-Castillo, Daniel Handwerker, Stephan Heunis, Angela Laird, Ross Markello, Stefano Moia, Taylor Salo, Joshua Teves, Eneko Uruñuela, Maryam Vaziri-Pashkam, Kirstie Whitaker

Abstract | Poster | Standby Times | Visit Poster

Interactive reports from tedana!

1291 Language network hyperconnectivity in MEG: marker ofresiliency in extremely preterm children

Maria Barnes-Davis, Hisako Fujiwara, Stephanie Merhar, Nehal Parikh, Darren Kadis

Abstract | Poster | Standby Times | Visit Poster

1377 Real-time fMRI Neurofeedback Training of theSupplementary Motor Area in Patients with Tic Disorders

Linda Orth, Halim Baqapuri, Camellia Ibrahim, Arnim Gaebler, Mikhail Zvyagintsev, Klaus Mathiak, Pegah Sarkheil, Irene Neuner

Abstract | Poster | Standby Times | Visit Poster

1400 Silent multi-echo fMRI at sub-second resolution using Extreme Coherence-Resolved Looping Star

Nikou Damestani, Andrew Leynes, Ana Beatriz Solana, David Lythgoe, Brice Fernandez, Brian Burns, Peder Larson, Steven Williams, Fernando Zelaya, Florian Wiesinger

Abstract | Poster Standby Times | Visit Poster

1540 Denoising physiological data collected during multi-band,multi-echo EPI sequences

Katherine Bottenhorn, Taylor Salo, Michael Riedel, Erica Musser,Jennifer Robinson, Matthew Sutherland, Angela Laird

Abstract | Poster | Standby Times | Visit Poster

1762 Synthesis-based paradigm free mapping and analysis-based total activation operate identically

Eneko Uruñuela, Stefano Moia, César Caballero-Gaudes

Abstract | Poster | Standby Times | Visit Poster

1869 A multimodal fusion study of spinocerebellar ataxia type 3 using parallel ICA + ICA on PET and fMRI

Harm Jan van der Horn, Jelmer Kok, Sanne Meles, Victor M. Vergara, Shile Qi, Vince Calhoun, Jelle Dalenberg, Bauke de Jong, Jeroen deVries, Joke Spikman, Hubertus Kremer

Abstract | Poster | Standby Times | Visit Poster

1893 Improved correspondence between fMRI and EEG estimatesof vigilance fluctuations with multi-echo ICA

Sarah Goodale, Bohan Jiang, Jennifer Evans, Jacco de Zwart, Pinar Ozbay, Dante Picchioni, Jeff Duyn, Dario Englot, Victoria Morgan, Catie Chang

Abstract | Poster | Standby Times | Visit Poster

1984 Comparing 7T fMRI protocols for imaging subcortical regionsas expectations guide visual priorities

Kelly Garner, Christopher Nolan, Markus Barth, Saskia Bollmann, Ole Jensen, Marta Garrido

Abstract | Poster | Standby Times | Visit Poster

2089 Post-traumatic complaints and resting-state connectivity inelderly with mild traumatic brain injury

Mayra Bittencourt-Villalpando, Harm Jan van der Horn, Sebastián Balart-Sánchez, Jan-Bernard Marsman, Natasha Maurits, Joukje van derNaalt

Abstract | Poster | Standby Times | Visit Poster

2132 Comparison of single- and multi-echo pre-processingstrategies for motion correction of rs-fMRI

Mihail Dimitrov, Nichol Wong, Dafnis Batalle, Owen O’Daly, Sydney Leaman, Lucas Franca, Andreia Pereira, Hester Velthuis, Claire Ellis,Francesca Ponteduro, Mark Tricklebank, Declan Murphy, GrainneMcAlonan, Eileen Daly

Abstract | Poster | Standby Times | Visit Poster

2276 Deep behavioral phenotyping reveals two multivariate axesof default network covariance

Manesh Girn, Danilo Bzdok, Amber Lockrow, Roni Setton, Laetitia Mwilambwe-Tshilobo, Gary Turner, Nathan Spreng

Abstract | Poster | Standby Times | Visit Poster

2311 Functional architecture of the aging brain

Roni Setton, Laetitia Mwilambwe-Tshilobo, Manesh Girn, Amber Lockrow, Giulia Baracchini, Alex Lowe, Benjamin Cassidy, Jian Li, Danilo Bzdock, Richard Leahy, Tian Ge, Daniel Margulies, Bratislav Misic, Boris Bernhardt, W. Stevens, Felipe De Brigard, Prantik Kundu, Gary Turner, Nathan Spreng

Abstract | Poster | Standby Times | Visit Poster

2410 Improving functional MRI using advanced multiband multi-echo EPI

Yang Wang, Alexander Cohen

Abstract | Poster | Standby Times | Visit Poster

2412 Multiple ways to process multi-echo FMRI data with AFNI

Paul Taylor, Stephen Gotts, Adrian Gilmore, Daniel Glen, Richard Reynolds

Abstract | Poster | Standby Times | Visit Poster

2430 Multimodal evidence that pupillary responses are useful for examining aging in the locus coeruleus

Elizabeth Riley, Hamid Turker, Khena Swallow, Adam Anderson, Eve De Rosa

Abstract | Poster | Standby Times | Visit Poster

2455 Altered inter-regional similarity in BOLD variability traces functional integration in aging

Giulia Baracchini, Laetitia Mwilambwe-Tshilobo, Roni Setton, Amber Lockrow, Gary Turner, Nathan Spreng

Abstract | Poster | Standby Times | Visit Poster

2521 Cardiac Gated Multiecho fMRI Analysis Methods Comparison

Tara Maronesy, Christine Sze Wan Law, Sean Mackey, Gary Glover

Abstract| Poster | Standby Times | Visit Poster

2643 Deep Linear Modeling of MultiBand MultiEcho fMRI Reveals Reproducible Hierarchical FC Networks – Duplicate

Wei Zhang, Yang Wang, Alexander Cohen, Michael McCrea, Pratik Mukherjee

Abtract | Standby Times | Visit Poster

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