From 726fdcb45e12b3b4c267d357326218cd4b44979a Mon Sep 17 00:00:00 2001 From: silvandeleemput Date: Thu, 8 Feb 2024 13:14:40 +0100 Subject: [PATCH] fix dependencies conflict new base image #39 --- models/gc_nnunet_pancreas/dockerfiles/Dockerfile | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/models/gc_nnunet_pancreas/dockerfiles/Dockerfile b/models/gc_nnunet_pancreas/dockerfiles/Dockerfile index 77cc05b9..22b43174 100644 --- a/models/gc_nnunet_pancreas/dockerfiles/Dockerfile +++ b/models/gc_nnunet_pancreas/dockerfiles/Dockerfile @@ -27,7 +27,7 @@ RUN git clone https://github.com/DIAGNijmegen/CE-CT_PDAC_AutomaticDetection_nnUn ENV SKLEARN_ALLOW_DEPRECATED_SKLEARN_PACKAGE_INSTALL=True # Install nnUNet 1.7.0 and other requirements -RUN pip3 install --no-cache-dir -r /opt/algorithm/requirements.txt +RUN pip3 install --no-cache-dir evalutils==0.3.0 nnunet==1.7.0 # Extend the nnUNet installation with custom trainers RUN SITE_PKG=`pip3 show nnunet | grep "Location:" | awk '{print $2}'` && \