Question on Running Inference - Gaussian

[jamesgwen]

Hello!

I'm reviewing the predict_from_raw_data.py file and noticed that by default, a gaussian is applied to the segmentations.

To clarify, when someone runs nnUNetv2_predict -i INPUT_FOLDER -o OUTPUT_FOLDER -d DATASET_NAME_OR_ID -c CONFIGURATION --save_probabilities, is a gaussian also applied to the predictions, if so why?

Thanks in adv!