select by aphia_id

davidsean · davidsean · commit 4da3908671e8 · 2024-10-01T13:26:59.000-04:00
diff --git a/make_access_IML-2024008.py b/make_access_IML-2024008.py
@@ -66,7 +66,7 @@
             engin = EnginMollusque(trait, output_cur)
             for e in engin:
                 # print(f"Engin: ", e)
-                capture = CaptureMollusque(engin, output_cur)
+                capture = CaptureMollusque(engin, output_cur, aphia_id_filter=aphia_id_filter, size_class_filter=size_class_filter)
                 for c in capture:
                     print(f"Capture: ", c)
 
diff --git a/make_access_IML-2024009.py b/make_access_IML-2024009.py
@@ -67,7 +67,7 @@
             engin = EnginMollusque(trait, output_cur)
             for e in engin:
                 # print(f"Engin: ", e)
-                capture = CaptureMollusque(engin, output_cur)
+                capture = CaptureMollusque(engin, output_cur, aphia_id_filter=aphia_id_filter, size_class_filter=size_class_filter)
                 for c in capture:
                     print(f"Capture: ", c)
 
diff --git a/make_access_IML-2024022.py b/make_access_IML-2024022.py
@@ -42,6 +42,12 @@
 aphia_id_filter = [buccinum_undatum]
 size_class_filter = [vivant_intact_size_class, vivant_brisé_size_class]
 
+ANDES_HOST = 'iml-science-1.ent.dfo-mpo.ca'
+ANDES_PORT = 24988
+ANDES_DB_NAME = 'andesdb'
+ANDES_DB_USERNAME = 'lecture_seulement'
+ANDES_DB_USERPASS = 'NOPE NO PASSWORD HERE'
+
 
 output_fname = f'./{no_notification}.mdb'
 shutil.copyfile('andes_migrate/ref_data/access_template.mdb', output_fname)
