checks.yml

name: checks

on:
  pull_request:
    types: [opened, synchronize]
    branches: [ master, dev ]
  merge_group:
    types: [checks_requested]
    branches: [ master ]





jobs:
  linux-clang-build:

    runs-on: ubuntu-latest

    env:
      CFLAGS: -Werror
      QT_SELECT: qt5
      SCCACHE_GHA_ENABLED: "true"
      SCCACHE_CACHE_SIZE: "2G"
      CXX_COMPILER_LAUNCHER: sccache

    steps:
    - uses: actions/checkout@v1

    - name: install dependencies
      run: |
         sudo apt-get update
         sudo apt-get install clang libqt5opengl5-dev libqt5svg5-dev libglvnd-dev libeigen3-dev zlib1g-dev libfftw3-dev python3-numpy

    - name: Run sccache-cache
      uses: mozilla-actions/sccache-action@v0.0.3

    - name: configure
      run: ./configure -assert || { cat configure.log; false; }

    - name: build
      run: ./build -nowarnings -persistent -nopaginate || { cat build.log; false; }

    - name: unit tests
      run: ./run_tests units || { cat testing_units.log; false; }

    - name: binary tests
      run: ./run_tests binaries || { cat testing_binaries.log; false; }






  linux-gcc-build:

    runs-on: ubuntu-latest

    env:
      CXX: g++-9
      CFLAGS: -Werror
      QT_SELECT: qt5
      SCCACHE_GHA_ENABLED: "true"
      SCCACHE_CACHE_SIZE: "2G"
      CXX_COMPILER_LAUNCHER: sccache

    steps:
    - uses: actions/checkout@v1

    - name: install dependencies
      run: |
         sudo apt-get update
         sudo apt-get install g++-9 libqt5opengl5-dev libqt5svg5-dev libglvnd-dev libeigen3-dev zlib1g-dev libfftw3-dev

    - name: Run sccache-cache
      uses: mozilla-actions/sccache-action@v0.0.3

    - name: configure
      run: ./configure -nooptim || { cat configure.log; false; }

    - name: build
      run: ./build -nowarnings -persistent -nopaginate || { cat build.log; false; }


  macos-build:

    runs-on: macos-latest

    env:
      CFLAGS: -Werror
      PACKAGES: "qt5 eigen pkg-config fftw libpng"
      SCCACHE_GHA_ENABLED: "true"
      SCCACHE_CACHE_SIZE: "2G"
      CXX_COMPILER_LAUNCHER: sccache

    steps:
    - uses: actions/checkout@v1

    - name: install dependencies
      run: |
         brew update || brew update     # https://github.com/Homebrew/brew/issues/2491#issuecomment-294207661
         brew install $PACKAGES || brew install $PACKAGES
         /usr/bin/python3 -m ensurepip && /usr/bin/pip3 install numpy
         brew link --force qt5

    - name: Run sccache-cache
      uses: mozilla-actions/sccache-action@v0.0.3

    - name: configure
      run: ./configure -assert || { cat configure.log; false; }

    - name: build
      run: ./build -nowarnings -persistent -nopaginate || { cat build.log; false; }

    - name: unit tests
      run: ./run_tests units || { cat testing_units.log; false; }

    - name: binary tests
      run: ./run_tests binaries || { cat testing_binaries.log; false; }

    - name: check command documentation
      run: ./docs/generate_user_docs.sh && git diff --exit-code docs/





  windows-build:

    runs-on: windows-latest
    defaults:
      run:
        shell: msys2 {0}

    env:
      # CFLAGS: -Werror
      CHERE_INVOKING: enabled_from_arguments
      MINGW_PACKAGE_PREFIX: mingw-w64-ucrt-x86_64
      SCCACHE_GHA_ENABLED: "true"
      SCCACHE_CACHE_SIZE: "2G"
      SCCACHE_DIR: ${{ github.workspace }}/.sccache

    steps:
      - uses: actions/checkout@v3

      - uses: msys2/setup-msys2@v2
        with:
          msystem: UCRT64
          release: false
          install: |
            git
            python
            python-pip
            ${{env.MINGW_PACKAGE_PREFIX}}-bc
            ${{env.MINGW_PACKAGE_PREFIX}}-diffutils
            ${{env.MINGW_PACKAGE_PREFIX}}-eigen3
            ${{env.MINGW_PACKAGE_PREFIX}}-fftw
            ${{env.MINGW_PACKAGE_PREFIX}}-gcc
            ${{env.MINGW_PACKAGE_PREFIX}}-libtiff
            ${{env.MINGW_PACKAGE_PREFIX}}-pkg-config
            ${{env.MINGW_PACKAGE_PREFIX}}-qt5-base
            ${{env.MINGW_PACKAGE_PREFIX}}-qt5-svg
            ${{env.MINGW_PACKAGE_PREFIX}}-zlib

      - name: Install numpy
        run: |
          /usr/bin/pip3 install numpy

      - name: Run sccache-cache
        uses: mozilla-actions/sccache-action@v0.0.3

      - name: export sccache to msys2 shell
        run: |
          export SCCACHE_UNIX_PATH=$(cygpath -u "$SCCACHE_PATH")
          echo "SCCACHE_UNIX_PATH=$SCCACHE_UNIX_PATH" >> $GITHUB_ENV

      - name: configure
        run: |
          export CXX_COMPILER_LAUNCHER=${{env.SCCACHE_UNIX_PATH}}
          ./configure -assert || { cat configure.log; false; }

      - name: build
        run: ./build -nowarnings -persistent -nopaginate || { cat build.log; false; }

      - name: unit tests
        run: ./run_tests units || { cat testing_units.log; false; }

      - name: binary tests
        run: ./run_tests binaries || { cat testing_binaries.log; false; }




  secondary-checks:

    runs-on: ubuntu-latest

    env:
      QT_SELECT: qt5

    steps:
    - uses: actions/checkout@v1

    - name: install dependencies
      run: |
         sudo apt-get update
         sudo apt-get install pylint python3-sphinx sphinx-rtd-theme-common python3-recommonmark python3-sphinx-rtd-theme python3-pip python3-sphinx-notfound-page

    - name: check syntax
      run: ./check_syntax || { cat syntax.log; false; }

    - name: pylint
      run: |
         echo "__version__ = 'pylint testing' #pylint: disable=unused-variable" > ./lib/mrtrix3/_version.py
         ./run_pylint || { cat pylint.log; false; }

    - name: check copyright headers
      run: ./update_copyright && git diff --exit-code

    - name: check building of documentation
      run: python3 -m sphinx -n -N -W -w sphinx.log docs/ tmp/