diff --git a/clang-format-all b/clang-format-all
index b5a5649c28..c8b855676b 100755
--- a/clang-format-all
+++ b/clang-format-all
@@ -34,11 +34,10 @@ parser.add_argument(
 
 args = parser.parse_args()
 clang_format = args.executable
-paths = ['core', 'cmd', 'src', 'testing']
+paths = ['cpp', 'testing']
 extensions = ['.h', '.cpp']
-exclusion_list = ['core/file/nifti1.h',
-                  'core/file/nifti2.h',
-                  'core/file/json.h']
+exclusion_list = ['cpp/lib/src/gui/gl_core_3_3.h',
+                  'cpp/lib/src/gui/gl_core_3_3.cpp']
 
 # if clang-format path contains spaces, wrap it in quotes
 if ' ' in clang_format and not clang_format.startswith('"'):