diff --git a/packages/mdctl-cli/lib/env/export.js b/packages/mdctl-cli/lib/env/export.js
index be747f5d..9572bef2 100644
--- a/packages/mdctl-cli/lib/env/export.js
+++ b/packages/mdctl-cli/lib/env/export.js
@@ -1,4 +1,5 @@
 /* eslint-disable max-len */
+const { ExportSection } = require('@medable/mdctl-core/streams/section')
 const { Transform } = require('stream')
 
 const fs = require('fs'),
@@ -180,6 +181,8 @@ const fs = require('fs'),
               return reject(new Error('Export not complete!'))
             }
 
+            ExportSection.clearSectionsWithResources()
+
             if (options.docs) {
               console.log('Documenting env')
               return Docs.generateDocumentation({