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How to prepare $DATA/annotation/1000Gp3.vcf.gz? #213

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biocyberman opened this issue Jan 6, 2018 · 0 comments
Open

How to prepare $DATA/annotation/1000Gp3.vcf.gz? #213

biocyberman opened this issue Jan 6, 2018 · 0 comments

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@biocyberman
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Hi
I am testing out cpipe 2.5.1
vcfanno is configured to use this annotation source. However, the installation process does not allow downloading data for vcfanno. Can I use this file instead? $DATA/1000G_phase3/1000G_phase3_v4_20130502.sites.hg19.vcf.gz
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@biocyberman