Update README

Molmed · Sep 20, 2024 · 769955d · 769955d
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diff --git a/README.md b/README.md
@@ -42,7 +42,7 @@ Run `python test_client.py` to run GEX and DNAm prediction on test datasets.
 Run `pytest`.
 
 ## Preprocessing GEX data
-To prepare gene expression for prediction using ALLIUM, you will need a CSV file with raw gene transcript counts. The gene identifiers should be HGNC gene symbols.
+To prepare gene expression for prediction using ALLIUM, you will need a CSV file with raw gene transcript counts. The leftmost column should be HGNC gene symbols or Ensembl identifiers.
 
 |         | Sample_1 | Sample_2 | ... |
 | --------| -------- | -------- | --- |

diff --git a/environment.yml b/environment.yml
@@ -14,4 +14,4 @@ dependencies:
     - numpy==1.19.5
     - pandas>=1.1.5
     - requests
-    - gene-thesaurus
+    - gene-thesaurus>=2.2.0