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43 Open 866 Closed
43 Open 866 Closed
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Issues list

Is there a way to force install Cellpose 2? If version is not specified, it installs Cellpose 3. install install help
#1067 opened Nov 27, 2024 by rmd13
Nuclear Mask Dilation: follow up to issue #1009 bug Something isn't working
#1066 opened Nov 26, 2024 by marsdenl
[FEATURE] Install the API only enhancement New feature or request
#1065 opened Nov 26, 2024 by nclement-cytoo
[BUG]Value Error when training Cellpose3 bug Something isn't working
#1064 opened Nov 25, 2024 by SelinaHhan
Issues with Cellpose on macOS using the MPS Backend install install help
#1063 opened Nov 23, 2024 by Vijayishwerj
[FEATURE] Larger than memory images: performant and scalable distributed implementation for workstations and clusters enhancement New feature or request
#1061 opened Nov 23, 2024 by GFleishman
[BUG] Drawing masks does not work properly at high ROI counts? bug Something isn't working
#1060 opened Nov 22, 2024 by JannikMen
Issue with io.masks_flows_to_seg in notebook example
#1059 opened Nov 21, 2024 by VivekJohnSudhakar
two-photon images segmentation enhancement New feature or request
#1057 opened Nov 21, 2024 by Hansihh1
[BUG] H&E image nucleus segmentation works with v2 but not with v3 bug Something isn't working
#1056 opened Nov 20, 2024 by gdurif
3
[BUG] Issue when running with post-release version of PyTorch bug Something isn't working
#1054 opened Nov 18, 2024 by MeyerBender
Cellpose3 running with Vizgen Post-processing Tool (VPT) enhancement New feature or request
#1053 opened Nov 14, 2024 by KunHHE
CRITICAL:cellpose.io:ERROR: could not read masks from file, can only convert an array of size 1 to a Python scalar
#1052 opened Nov 14, 2024 by jusforwork15
Still having drawing bug where masks wont actually be created once drawn
#1051 opened Nov 14, 2024 by mayishazn
7
[FEATURE] calibrate diameter with command line enhancement New feature or request
#1050 opened Nov 13, 2024 by jazberna1
Cell pose graph from plot.show_segmentation
#1048 opened Nov 12, 2024 by antopHU
RuntimeError: nonzero is not supported for tensors with more than INT_MAX elements bug Something isn't working
#1046 opened Nov 12, 2024 by Lem-P
2
segmentation of nuclei + membranes
#1043 opened Nov 7, 2024 by Kaltzisp
[BUG] Minor: Ensure to use weights_only=True for all torch.load bug Something isn't working
#1042 opened Nov 7, 2024 by ashishUthama
[BUG] normalisation problem? bug Something isn't working
#1041 opened Nov 4, 2024 by TomPJWyatt
[INSTALL] How to train the model on another annotated dataset (transfer learning) install install help
#1039 opened Nov 1, 2024 by AyaMohamedS
[BUG] Crashing during headless processing a folder of 3D z stacks bug Something isn't working
#1038 opened Oct 31, 2024 by derekthirstrup
4
[BUG] Error saving flows and cellprob tif image bug Something isn't working
#1037 opened Oct 31, 2024 by derekthirstrup
1
[BUG] Cellpose 3 using GPU macOS M1 bug Something isn't working mac mac M1/M2 issues
#1034 opened Oct 30, 2024 by AlabC
9
[BUG] Different Segementation Result between GUI and Python command bug Something isn't working
#1026 opened Oct 10, 2024 by HaofeiGe
3
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