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Senior researcher @ DFKI - German Research Center for Artificial Intelligence.
I am especially interested in genomics and machine learning.
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dna-llm/learning-nucleotides
dna-llm/learning-nucleotides PublicA comparison of next-token-prediction-Models for DNA sequences. We provide a new loss function to inform models of DNA 1D-topology.
Python
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qcGenes_manuscript
qcGenes_manuscript PublicWorkflows for correlation of Expression and peaks with file quality, related to our paper "Overlooked poor-quality patient samples in sequencing data impair reproducibility of published clinically …
Jupyter Notebook
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UPOBioinfo/crispromeskape
UPOBioinfo/crispromeskape PublicScripts to analyze the data for the paper "An outstanding bacterial membranome requires CRISPR-Cas systems to avoid the intervention of phages" and derive the figures or subfigures shown in the man…
Python 1
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