Update README.md

PW41_2024_MIT/Projects/AnIgtMastersCourseBasedOnSlicer/README.md

@@ -1,28 +1,25 @@
----
-layout: pw41-project
-
-permalink: /:path/
-
-project_title: An IGT Masters course based on Slicer
-category: IGT and Training
-presenter_location: In-person
-
-key_investigators:
-
-- name: Simon Drouin
-  affiliation: ETS
-  country: Canada
-
-- name: Rafael Palomar
-  affiliation: Oslo University Hospital / NTNU
-  country: Norway
-
----
-
-# Project Description
-
-<!-- Add a short paragraph describing the project. -->
-
+---
+layout: pw41-project
+
+permalink: /:path/
+
+project_title: An IGT Masters course based on Slicer
+category: IGT and Training
+presenter_location: In-person
+
+key_investigators:
+
+- name: Simon Drouin
+  affiliation: ETS
+  country: Canada
+
+- name: Rafael Palomar
+  affiliation: Oslo University Hospital / NTNU
+  country: Norway
+
+---
+
+# Project Description
 
 The goal of this project is to improve the lecture and demo material for the Master's level at ETS Montreal entitled "Surgical Technologies" (see course website [here](https://www.etsmtl.ca/etudes/cours/gts880a), in French). 
 
@@ -36,57 +33,39 @@ By the end of the course, students expected to:
 
 The practical work in the course is all based on the use of 3D Slicer.
 
-
-
-## Objective
-
-<!-- Describe here WHAT you would like to achieve (what you will have as end result). -->
-
+## Objective
 
 1. Identify existing tutorials that can help students of the course learn about the Slicer features they can take advantage of in their term project
 2. List existing surgical technologies that are not already covered in the class and determine whether a prototype can easily be built based on existing Slicer modules.
 3. List publicly available datasets that can be used to build IGT prototypes for different types of procedures. 
 
-
-
-
-## Approach and Plan
-
-<!-- Describe here HOW you would like to achieve the objectives stated above. -->
-
+## Approach and Plan
 
 1. Find people who have an interest in a similar course and discuss material they already have to train people, even in other context
 2. List existing tutorial and new material on this page
 3. Identify a format that would enable the sharing of course material under a creative commons license (pick a licence)
 4. List existing sources of publicly available medical images and their surgical application
 
-
-
-## Progress and Next Steps
-
-<!-- Update this section as you make progress, describing of what you have ACTUALLY DONE.
-     If there are specific steps that you could not complete then you can describe them here, too. -->
-
+## Progress and Next Steps
 
-1. Describe specific steps you **have actually done**.
+1. Tamas: Shared very nice slides on coordinate transformations and how to go from one space to another that complement existing course material
+2. Sara Vidal Fernandez: Provides DBS data for use in project files
+3. Nazim: Indicated the Zenodo database as an interesting source of publicly available patient scans that can be used in student projects
+4. Andrey Fedorov: Showed how to find relevant medical images from the IDC database
+   5. Discussed the limitations of the web interface for searching
+   6. Pointed to tutorials on how to use the Python interface for advanced search: [IDC getting started](https://learn.canceridc.dev/getting-started-with-idc)
 
+# Illustrations
 
-
-
-# Illustrations
-
-<!-- Add pictures and links to videos that demonstrate what has been accomplished. -->
-
+<!-- Add pictures and links to videos that demonstrate what has been accomplished. -->
 
-_No response_
 
-
-
-# Background and References
-
-<!-- If you developed any software, include link to the source code repository.
-     If possible, also add links to sample data, and to any relevant publications. -->
-
 
-_No response_
-
+# Background and References
+
+<!-- If you developed any software, include link to the source code repository.
+     If possible, also add links to sample data, and to any relevant publications. -->
+
+
+_No response_
+