From f286711b751a28d0aa29fe2691c8f92da3239124 Mon Sep 17 00:00:00 2001 From: Mahesh Binzer-Panchal Date: Thu, 5 Aug 2021 11:17:30 +0200 Subject: [PATCH 1/3] Add CITATION.cff --- CITATION.cff | 29 +++++++++++++++++++++++++++++ 1 file changed, 29 insertions(+) create mode 100644 CITATION.cff diff --git a/CITATION.cff b/CITATION.cff new file mode 100644 index 00000000..4d3f66a4 --- /dev/null +++ b/CITATION.cff @@ -0,0 +1,29 @@ +# YAML 1.2 +--- +abstract: "A set of workflows written in Nextflow for Genome Annotation. " +authors: + - + affiliation: "National Bioinformatics Infrastructure Sweden (NBIS) / Uppsala University" + family-names: "Binzer-Panchal" + given-names: Mahesh + orcid: "https://orcid.org/https://orcid.org/0000-0003-1675-0677" + - + family-names: Dainat + given-names: Jacques + orcid: "https://orcid.org/https://orcid.org/0000-0002-6629-0173" + - + family-names: Soler + given-names: Lucile + orcid: "https://orcid.org/https://orcid.org/0000-0002-0121-2393" +cff-version: "1.1.0" +date-released: 2021-08-05 +keywords: + - Nextflow + - "Genome Annotation" + - "Functional Annotation" +license: "GNU General Public License v3.0" +message: "If you use this software, please cite it using these metadata." +repository-code: "https://github.com/NBISweden/pipelines-nextflow" +title: "NBIS Genome Annotation Workflows" +version: "v1.0.0" +... \ No newline at end of file From a683ba519dd7d19bb71172a6bd92aec80c912646 Mon Sep 17 00:00:00 2001 From: Mahesh Binzer-Panchal Date: Fri, 13 Aug 2021 09:53:13 +0200 Subject: [PATCH 2/3] Add newline --- CITATION.cff | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/CITATION.cff b/CITATION.cff index 4d3f66a4..99c7ddc2 100644 --- a/CITATION.cff +++ b/CITATION.cff @@ -1,7 +1,7 @@ # YAML 1.2 --- abstract: "A set of workflows written in Nextflow for Genome Annotation. " -authors: +authors: - affiliation: "National Bioinformatics Infrastructure Sweden (NBIS) / Uppsala University" family-names: "Binzer-Panchal" @@ -17,7 +17,7 @@ authors: orcid: "https://orcid.org/https://orcid.org/0000-0002-0121-2393" cff-version: "1.1.0" date-released: 2021-08-05 -keywords: +keywords: - Nextflow - "Genome Annotation" - "Functional Annotation" @@ -26,4 +26,4 @@ message: "If you use this software, please cite it using these metadata." repository-code: "https://github.com/NBISweden/pipelines-nextflow" title: "NBIS Genome Annotation Workflows" version: "v1.0.0" -... \ No newline at end of file +... From af9edda1f8b2309824b15703bdd43babd23b57cb Mon Sep 17 00:00:00 2001 From: Mahesh Binzer-Panchal Date: Fri, 13 Aug 2021 10:02:39 +0200 Subject: [PATCH 3/3] Add acknowledgements and github ID's --- README.md | 13 ++++++++++--- 1 file changed, 10 insertions(+), 3 deletions(-) diff --git a/README.md b/README.md index 8a96ed03..3e439cf5 100644 --- a/README.md +++ b/README.md @@ -13,9 +13,16 @@ If you use these pipelines in your work, please acknowledge NBIS within your com ## Maintainers -* Mahesh Binzer-Panchal (Nextflow, Reproducibility) -* Jacques Dainat (Annotation expert, Nextflow, Conda) -* Lucile Soler (Annotation expert) +* Mahesh Binzer-Panchal (\@mahesh-panchal; Nextflow, Reproducibility) +* Jacques Dainat (\@Juke34; Annotation expert, Nextflow, Conda) +* Lucile Soler (\@LucileSol; Annotation expert) + +### Acknowledgements + +These workflows were based on the Bpipe workflows written by +Marc Höppner (\@marchoeppner) and Jacques Dainat (\@Juke34). + +Thank you to everyone who contributes to this project. ## Installation and Usage