Reformat scripts to conform with PEP8 style

[jaredalee]

Describe the Task

Use PyCharm to help reformat all scripts in this repo to use PEP8 style.

Time Estimate

1–2 hours

Relevant Deadlines

NONE

New Parameters

NONE

Technical References

PEP8 Style Guide
PyCharm guide

Funding Source

Multiscale Workflow project

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Task Checklist

• Complete the issue definition above, including the Time Estimate and Funding Source.
• Fork this repository or create a branch of main.
  Branch name: feature_<Issue Number>_<Description>
• Complete the development and test your changes.
• Add/update log messages for easier debugging.
• Add/update unit tests.
• Add/update documentation.
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• Iterate until the reviewer(s) accept and merge your changes.
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