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XeofilteR for other species #29

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aliibarry opened this issue Sep 4, 2024 · 1 comment
Open

XeofilteR for other species #29

aliibarry opened this issue Sep 4, 2024 · 1 comment

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@aliibarry
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Hi, nice package! Have you trialled this against other species with well annotated genomes (eg. rat)?
@RoelKluin
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Yes, other species should also work. It is also possible to align against a custom fasta with HPV sequences and human for instance. Only if the alternative reference also includes human sequence, then reads aligning there will be filtered.

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@RoelKluin @aliibarry