Added copepods_time.R following Sarah W's script as a guide. Still ne…

…ed to get GB specific copepod time series data from Harvey Walsh

fitting/copepods_time.R

@@ -0,0 +1,15 @@
+# Title: Copepod Biomass Time Series
+# Purpose: This script generates a time series of large and small copepod biomass to be
+#           used for fitting the 1980-85 Gulf of Maine Rpath model to data.
+#         
+# Data files: (1) data/ZooData_GOM.csv, (2) data/EcoMon_Copepod size.csv from Harvey Walsh
+#            (1) Ecomon data filtered for region, taxa of interest
+#            (2) Parameters for converting abundance to biomass for taxa of interest
+#
+# Author: M.T. Grezlik
+# Contact details: [email protected]
+# following the example of S. Weisberg
+# https://github.com/SarahJWeisberg/GOM-Rpath/blob/main/fitting/copepods_time.R
+
+
+# https://github.com/NOAA-EDAB/benthosindex/blob/main/data/survdat_nobio.rds