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fixes #67 Fixed dependency upgrades #63

fixes #67 Fixed dependency upgrades

fixes #67 Fixed dependency upgrades #63

Workflow file for this run

# This workflow builds the WRES and executes system tests against various scenarios
name: Code Checks
on:
push:
pull_request:
jobs:
Build:
runs-on: ubuntu-latest
permissions:
contents: read
steps:
- uses: actions/checkout@v4
- name: Set up JDK 17
uses: actions/setup-java@v4
with:
java-version: '17'
distribution: 'temurin'
# Configure Gradle for optimal use in GiHub Actions, including caching of downloaded dependencies.
# See: https://github.com/gradle/actions/blob/main/setup-gradle/README.md
- name: Setup Gradle
uses: gradle/actions/setup-gradle@417ae3ccd767c252f5661f1ace9f835f9654f2b5 # v3.1.0
# Run and build using gradle
# Disable aggregateJavaDocs
- name: Run build
run: ./gradlew distZip testCodeCoverageReport javadoc
# Confirm the test code inside wres-external-services-tests zip compiles
- name: Compile external-services-tests
run: |
cd wres-external-services-tests
../gradlew installDist
cd build/install/wres-external-services-tests
./gradlew testClasses
# Create the system tests zip
- name: Create systests zip
run: |
cd systests
../gradlew distZip installDist
# Create the admin scripts zip
- name: Create admin scripts
run: |
cd scripts
../gradlew distZip
- name: Creating md5
run: |
md5sum build/distributions/wres-*.zip >> checksum.txt
md5sum wres-*/build/distributions/wres-*-*.zip >> checksum.txt
md5sum systests/build/distributions/systests-*.zip >> checksum.txt
md5sum scripts/build/distributions/wres-admin-scripts-*.zip >> checksum.txt
# Archive the artifacts created from this build
- name: Archive artifacts
uses: actions/upload-artifact@v4
with:
name: build-artifacts
path: |
checksum.txt
build/distributions/wres-*.zip
wres-*/build/distributions/wres-*-*.zip
systests/build/distributions/systests-*.zip
scripts/build/distributions/wres-admin-scripts-*.zip
systests:
needs: Build
runs-on: ubuntu-latest
permissions:
contents: read
steps:
- uses: actions/checkout@v4
- name: Set up JDK 17
uses: actions/setup-java@v4
with:
java-version: '17'
distribution: 'temurin'
# Configure Gradle for optimal use in GiHub Actions, including caching of downloaded dependencies.
# See: https://github.com/gradle/actions/blob/main/setup-gradle/README.md
- name: Setup Gradle
uses: gradle/actions/setup-gradle@417ae3ccd767c252f5661f1ace9f835f9654f2b5 # v3.1.0
# Download artifacts from previous step
- name: Download Artifacts
uses: actions/download-artifact@v4
with:
github-token: ${{ github.token }}
# Set env variables for zip versions
- name: Set git envs
run: |
# Get the wres versions from their respective zips and storing these to env
echo "wres_version=$(ls build-artifacts/build/distributions | tail -1 | cut -d '-' -f 2-3 | cut -d'.' -f 1)" >> "$GITHUB_ENV"
echo "wres_vis=$(ls build-artifacts/wres-vis/build/distributions | tail -1 | cut -d '-' -f 3-4 | cut -d'.' -f 1)" >> "$GITHUB_ENV"
echo "wres_writing=$(ls build-artifacts/wres-writing/build/distributions | tail -1 | cut -d '-' -f 3-4 | cut -d'.' -f 1)" >> "$GITHUB_ENV"
unzip build-artifacts/systests/build/distributions/systests-*[a-f0-9].zip
echo "systests_dir=$( ls -1d systests-*[a-f0-9] )" >> "$GITHUB_ENV"
# Run systests
- name: System tests in memory
run: |
echo "Starting the system tests in memory..."
# Configure the parameters sent to the test JVM in the settings file (avoids some quoting/escaping issues).
# TODO: replace with -P gradle property overrides in the test command once the quoting/escaping issues can be worked out
sed -i "s/testJvmSystemProperties =.*/testJvmSystemProperties = -Dwres.useSSL=false -Dwres.useDatabase=false -Djava.awt.headless=true -Dwres.dataDirectory=. -Djava.io.tmpdir=.. -Ducar.unidata.io.http.maxReadCacheSize=200000 -Ducar.unidata.io.http.httpBufferSize=200000 -Dwres.attemptToMigrate=false -Duser.timezone=UTC -Dwres.externalGraphics=false -Dwres.externalNumerics=false -Dwres.startBroker=false -Dwres.eventsBrokerAddress=localhost -Dwres.eventsBrokerPort=5673/g" $systests_dir/gradle.properties
sed -i "s/testJvmSystemPropertiesGraphics =.*/testJvmSystemPropertiesGraphics = -Djava.io.tmpdir=. -Dwres.startBroker=true -Dwres.eventsBrokerAddress=localhost -Dwres.eventsBrokerPort=5673/g" $systests_dir/gradle.properties
sed -i "s/testJvmSystemPropertiesWriting =.*/testJvmSystemPropertiesWriting = -Djava.io.tmpdir=. -Dwres.startBroker=false -Dwres.eventsBrokerAddress=localhost -Dwres.eventsBrokerPort=5673/g" $systests_dir/gradle.properties
# Run the tests
$systests_dir/gradlew -p $systests_dir cleanTest test -PwresZipDirectory=../build-artifacts/build/distributions/ -PwresGraphicsZipDirectory=../build-artifacts/wres-vis/build/distributions/ -PwresWritingZipDirectory=../build-artifacts/wres-writing/build/distributions/ -PversionToTest=$wres_version -PgraphicsVersionToTest=$wres_vis -PwritingVersionToTest=$wres_writing --tests=Scenario052 --tests=Scenario053 --tests=Scenario1000 --tests=Scenario1001 --tests=Scenario500 --tests=Scenario501 --tests=Scenario502 --tests=Scenario504 --tests=Scenario505 --tests=Scenario506 --tests=Scenario507 --tests=Scenario508 --tests=Scenario509 --tests=Scenario510 --tests=Scenario511 --tests=Scenario512 --tests=Scenario513 --tests=Scenario514 --tests=Scenario720 --tests=Scenario721
# Save the test results
mkdir -p test_results_0
mv systests-*/build/reports/tests/test/* test_results_0
mv systests-*/build/*.log test_results_0
# Run systests
- name: System tests with external graphics and numerics writing
run: |
echo "Starting the system tests with external graphics and numerics writing..."
# Configure the parameters sent to the test JVM in the settings file (avoids some quoting/escaping issues).
# TODO: replace with -P gradle property overrides in the test command once the quoting/escaping issues can be worked out
sed -i "s/testJvmSystemProperties =.*/testJvmSystemProperties = -Dwres.useSSL=false -Dwres.useDatabase=true -Dwres.databaseJdbcUrl=jdbc:h2:mem:test;MODE=REGULAR;TRACE_LEVEL_FILE=4;DB_CLOSE_DELAY=-1;INIT=create schema if not exists wres\\; -Djava.awt.headless=true -Dwres.dataDirectory=. -Djava.io.tmpdir=.. -Ducar.unidata.io.http.maxReadCacheSize=200000 -Ducar.unidata.io.http.httpBufferSize=200000 -Dwres.attemptToMigrate=true -Duser.timezone=UTC -Dwres.externalGraphics=true -Dwres.externalNumerics=true -Dwres.startBroker=false -Dwres.eventsBrokerAddress=localhost -Dwres.eventsBrokerPort=5673/g" $systests_dir/gradle.properties
sed -i "s/testJvmSystemPropertiesGraphics =.*/testJvmSystemPropertiesGraphics = -Djava.io.tmpdir=. -Dwres.startBroker=true -Dwres.eventsBrokerAddress=localhost -Dwres.eventsBrokerPort=5673/g" $systests_dir/gradle.properties
sed -i "s/testJvmSystemPropertiesWriting =.*/testJvmSystemPropertiesWriting = -Djava.io.tmpdir=. -Dwres.startBroker=false -Dwres.eventsBrokerAddress=localhost -Dwres.eventsBrokerPort=5673/g" $systests_dir/gradle.properties
# Run the tests using a separate graphics and writing process
$systests_dir/gradlew -p $systests_dir cleanTest test -PwresZipDirectory=../build-artifacts/build/distributions/ -PwresGraphicsZipDirectory=../build-artifacts/wres-vis/build/distributions/ -PwresWritingZipDirectory=../build-artifacts/wres-writing/build/distributions/ -PversionToTest=$wres_version -PgraphicsVersionToTest=$wres_vis -PwritingVersionToTest=$wres_writing --tests=Scenario052 --tests=Scenario053 --tests=Scenario1000 --tests=Scenario1001 --tests=Scenario500 --tests=Scenario501 --tests=Scenario502 --tests=Scenario504 --tests=Scenario505 --tests=Scenario506 --tests=Scenario507 --tests=Scenario508 --tests=Scenario509 --tests=Scenario510 --tests=Scenario511 --tests=Scenario512 --tests=Scenario513 --tests=Scenario514 --tests=Scenario720 --tests=Scenario721
# Save the test results
mkdir -p test_results_1
mv systests-*/build/reports/tests/test/* test_results_1
mv systests-*/build/*.log test_results_1
# Run systests
- name: System tests with an H2 in-memory database
run: |
echo "Starting the system tests with an H2 in-memory database..."
# Configure the parameters sent to the test JVM in the settings file (avoids some quoting/escaping issues).
# TODO: replace with -P gradle property overrides in the test command once the quoting/escaping issues can be worked out
sed -i "s/testJvmSystemProperties =.*/testJvmSystemProperties = -Dwres.useSSL=false -Dwres.databaseJdbcUrl=jdbc:h2:mem:test;MODE=REGULAR;TRACE_LEVEL_FILE=4;DB_CLOSE_DELAY=-1;INIT=create schema if not exists wres\\; -Djava.awt.headless=true -Dwres.dataDirectory=. -Djava.io.tmpdir=.. -Ducar.unidata.io.http.maxReadCacheSize=200000 -Ducar.unidata.io.http.httpBufferSize=200000 -Dwres.attemptToMigrate=true -Duser.timezone=UTC -Dwres.externalGraphics=false -Dwres.externalNumerics=false/g" $systests_dir/gradle.properties
# Run the tests again using a self-contained graphics/eventsbroker process
$systests_dir/gradlew -p $systests_dir cleanTest test -PwresZipDirectory=../build-artifacts/build/distributions/ -PwresGraphicsZipDirectory=../build-artifacts/wres-vis/build/distributions/ -PwresWritingZipDirectory=../build-artifacts/wres-writing/build/distributions/ -PversionToTest=$wres_version -PgraphicsVersionToTest=$wres_vis -PwritingVersionToTest=$wres_writing --tests=Scenario052 --tests=Scenario053 --tests=Scenario1000 --tests=Scenario1001 --tests=Scenario500 --tests=Scenario501 --tests=Scenario502 --tests=Scenario504 --tests=Scenario505 --tests=Scenario506 --tests=Scenario507 --tests=Scenario508 --tests=Scenario509 --tests=Scenario510 --tests=Scenario511 --tests=Scenario512 --tests=Scenario513 --tests=Scenario514 --tests=Scenario720 --tests=Scenario721
# Save the test results
mkdir -p test_results_2
mv systests-*/build/reports/tests/test/* test_results_2
# Run systests
- name: System tests with the legacy XML evaluation language
run: |
echo "Starting the system tests with the legacy XML evaluation language..."
# Configure the parameters sent to the test JVM in the settings file (avoids some quoting/escaping issues).
# TODO: replace with -P gradle property overrides in the test command once the quoting/escaping issues can be worked out
sed -i "s/testJvmSystemProperties =.*/testJvmSystemProperties = -Dwres.useSSL=false -Dwres.databaseJdbcUrl=jdbc:h2:mem:test;MODE=REGULAR;TRACE_LEVEL_FILE=4;DB_CLOSE_DELAY=-1;INIT=create schema if not exists wres\\; -Djava.awt.headless=true -Dwres.dataDirectory=. -Djava.io.tmpdir=.. -Ducar.unidata.io.http.maxReadCacheSize=200000 -Ducar.unidata.io.http.httpBufferSize=200000 -Dwres.attemptToMigrate=true -Duser.timezone=UTC -Dwres.externalGraphics=false -Dwres.externalNumerics=false -Dwres.xml=true/g" $systests_dir/gradle.properties
# Run the tests again using a self-contained graphics/eventsbroker process
$systests_dir/gradlew -p $systests_dir cleanTest test -PwresZipDirectory=../build-artifacts/build/distributions/ -PwresGraphicsZipDirectory=../build-artifacts/wres-vis/build/distributions/ -PwresWritingZipDirectory=../build-artifacts/wres-writing/build/distributions/ -PversionToTest=$wres_version -PgraphicsVersionToTest=$wres_vis -PwritingVersionToTest=$wres_writing --tests=Scenario052 --tests=Scenario053 --tests=Scenario1000 --tests=Scenario1001 --tests=Scenario500 --tests=Scenario501 --tests=Scenario502 --tests=Scenario504 --tests=Scenario505 --tests=Scenario506 --tests=Scenario507 --tests=Scenario508 --tests=Scenario509 --tests=Scenario510 --tests=Scenario511 --tests=Scenario512 --tests=Scenario720 --tests=Scenario721
# Save the test results
mkdir -p test_results_3
mv systests-*/build/reports/tests/test/* test_results_3
# Archive the artifacts created from this build
- name: Archive system tests
uses: actions/upload-artifact@v4
with:
name: systest-result-artifacts
path: |
test_results_0
test_results_1
test_results_2
test_results_3
dependency-submission:
runs-on: ubuntu-latest
permissions:
contents: write
steps:
- uses: actions/checkout@v4
- name: Set up JDK 17
uses: actions/setup-java@v4
with:
java-version: '17'
distribution: 'temurin'
# Generates and submits a dependency graph, enabling Dependabot Alerts for all project dependencies.
# See: https://github.com/gradle/actions/blob/main/dependency-submission/README.md
- name: Generate and submit dependency graph
uses: gradle/actions/dependency-submission@417ae3ccd767c252f5661f1ace9f835f9654f2b5 # v3.1.0