From 0492f1928622c2b1222a2027a35e6c39e9c25f95 Mon Sep 17 00:00:00 2001
From: Remi-Andre Olsen <remi-andre.olsen@scilifelab.se>
Date: Mon, 15 Apr 2024 11:01:55 +0200
Subject: [PATCH] Add test for explore

---
 .github/workflows/anglerfish.yml | 8 +++++++-
 1 file changed, 7 insertions(+), 1 deletion(-)

diff --git a/.github/workflows/anglerfish.yml b/.github/workflows/anglerfish.yml
index 0bef153..41643c4 100644
--- a/.github/workflows/anglerfish.yml
+++ b/.github/workflows/anglerfish.yml
@@ -37,4 +37,10 @@ jobs:
       - shell: bash -l {0}
         name: Run anglerfish with test data
         run: |
-          anglerfish -s test/samples.csv
+          anglerfish run -s test/samples.csv
+
+      # Run anglerfish explore
+      - shell: bash -l {0}
+        name: Run anglerfish explore
+        run: |
+          anglerfish explore -f test/BC18_P14351_1001.fastq.gz -o test/explore_output