diff --git a/anglerfish/demux/adaptor.py b/anglerfish/demux/adaptor.py index ea369fb..69e7ea1 100644 --- a/anglerfish/demux/adaptor.py +++ b/anglerfish/demux/adaptor.py @@ -131,7 +131,6 @@ def load_adaptors(raw=False): return adaptors_raw adaptors = [] for adaptor in adaptors_raw: - # This is now broken, I think adaptors.append( Adaptor(adaptors_raw, "N", adaptor, i7_index=None, i5_index=None) ) diff --git a/anglerfish/demux/samplesheet.py b/anglerfish/demux/samplesheet.py index 60dc324..f01c9cc 100644 --- a/anglerfish/demux/samplesheet.py +++ b/anglerfish/demux/samplesheet.py @@ -12,7 +12,7 @@ udelim = re.compile(r"(\)") ulen = re.compile(r"\") adaptors = load_adaptors(raw=True) -# Holy merge conflict, Batman! Fix this later +# This is some leftover ugliness from a merge conflict to reconcile the old and new adaptor classes delim = ""