Skip to content

Issues: NationalGenomicsInfrastructure/anglerfish

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

15 Open 39 Closed
15 Open 39 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Strange truncation of fastq files when demultiplexing short Illumina inserts libraries
#90 opened Aug 27, 2024 by j0n0curry
2
add sample indexes to report
#89 opened Aug 19, 2024 by FranBonath
2
add more metadata in the anglerfish report enhancement New feature or request
#88 opened Aug 19, 2024 by FranBonath 1.0.0
3
A more lenient lenient mode enhancement New feature or request
#80 opened Apr 4, 2024 by remiolsen 1.0.0
More opinionated checks and warnings pushed to the anglerfish report enhancement New feature or request
#79 opened Mar 13, 2024 by remiolsen 1.0.0
Update PyPi build-and-publish github action invalid This doesn't seem right
#78 opened Feb 16, 2024 by remiolsen
Explore command should compare adaptor sequences and collapse results for identical ones
#74 opened Feb 13, 2024 by alneberg
Tidy up paf stats and umatch and match counts bug Something isn't working
#66 opened Jan 25, 2024 by remiolsen 1.0.0
Report the total number of unmatched reads enhancement New feature or request
#64 opened Jan 24, 2024 by remiolsen 1.0.0
Add support for .bam input enhancement New feature or request low priority
#60 opened Jan 19, 2024 by remiolsen
Samplesheet-free mode enhancement New feature or request
#57 opened Jan 12, 2024 by remiolsen 1.0.0
1
Write extensive documentation enhancement New feature or request
#51 opened Nov 28, 2023 by remiolsen
4 tasks
1.0.0
Parse ONT metadata from fastq files enhancement New feature or request low priority
#46 opened Nov 2, 2023 by remiolsen
Use custom adaptor templates from command-line enhancement New feature or request
#42 opened Sep 13, 2023 by remiolsen
Output: Simulate illumina reads
#8 opened Apr 16, 2020 by ewels
ProTip! Find all open issues with in progress development work with linked:pr.