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NGI Pipeline Update
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@sylvinite sylvinite released this 16 Jan 10:25
· 773 commits to master since this release
v1.5
e55fc51
  • NGI Pipeline updated to version 0.1.6 with, amongst other things, support for the NextFlow Rna-Seq pipeline
  • MultiQC and MultiQC NGI updated to version 0.9 and 0.3.1 respectively to graph some new features and fix some bugs.
  • uppnex_datadeliver script has been included, for data deliveries (primarily used by Uppsala for now)
  • The standalone_scripts repo has been included, for small production ready scripts with hardly any dependencies
  • R dependencies removed from NGI_Pipeline
  • NextFlow variables added to properly support the module load
  • Piper module load is reinstated in order to run NGI_Pipeline. Removal of this will be saved for a latter version.
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