From 3ef1e59222113467ffabc6da043bccc08a78cc3a Mon Sep 17 00:00:00 2001 From: pgleeson Date: Thu, 27 Jun 2024 12:36:54 +0100 Subject: [PATCH] Add omv tests --- .github/workflows/omv-ci.yml | 41 ++++++++++++++++++++++++ .gitignore | 3 ++ spherSomaSwc/NeuroML2/.test.jnmleden.omt | 8 +++++ spherSomaSwc/NeuroML2/.test.jnmlnrn.omt | 8 +++++ spherSomaSwc/NeuroML2/.test.validate.omt | 5 +++ 5 files changed, 65 insertions(+) create mode 100644 .github/workflows/omv-ci.yml create mode 100644 spherSomaSwc/NeuroML2/.test.jnmleden.omt create mode 100644 spherSomaSwc/NeuroML2/.test.jnmlnrn.omt create mode 100644 spherSomaSwc/NeuroML2/.test.validate.omt diff --git a/.github/workflows/omv-ci.yml b/.github/workflows/omv-ci.yml new file mode 100644 index 0000000..5c74a42 --- /dev/null +++ b/.github/workflows/omv-ci.yml @@ -0,0 +1,41 @@ + +name: Continuous build using OMV + +on: + schedule: + - cron: "1 1 1 */2 *" + push: + branches: [ main, development, experimental, test* ] + pull_request: + branches: [ main, development, experimental, test* ] + +jobs: + build: + + runs-on: ubuntu-latest + strategy: + fail-fast: false + matrix: + python-version: [ 3.9, "3.11" ] + engine: [ jNeuroML_validate, jNeuroML_NEURON, jNeuroML_EDEN ] + + steps: + - uses: actions/checkout@v4 + + - name: Set up Python ${{ matrix.python-version }} + uses: actions/setup-python@v5 + with: + python-version: ${{ matrix.python-version }} + + - name: Install OMV + run: | + pip install git+https://github.com/OpenSourceBrain/osb-model-validation + + - name: Run OMV tests on engine ${{ matrix.engine }} + run: | + omv all -V --engine=${{ matrix.engine }} + + - name: OMV final version info + run: | + omv list -V # list installed engines + env diff --git a/.gitignore b/.gitignore index 89fd466..6374e13 100644 --- a/.gitignore +++ b/.gitignore @@ -11,3 +11,6 @@ build arm64 /spherSomaSwc/NeuroML2/*.dat /spherSomaSwc/NeuroML2/simulator.props +*_code.gen.c +*_code.gen.so +*_eden.py diff --git a/spherSomaSwc/NeuroML2/.test.jnmleden.omt b/spherSomaSwc/NeuroML2/.test.jnmleden.omt new file mode 100644 index 0000000..af52220 --- /dev/null +++ b/spherSomaSwc/NeuroML2/.test.jnmleden.omt @@ -0,0 +1,8 @@ +# Script for running automated tests on OSB, see https://github.com/OpenSourceBrain/osb-model-validation + +target: LEMS_pyrfull_out.xml +engine: jNeuroML_EDEN + + + + diff --git a/spherSomaSwc/NeuroML2/.test.jnmlnrn.omt b/spherSomaSwc/NeuroML2/.test.jnmlnrn.omt new file mode 100644 index 0000000..1b43d0c --- /dev/null +++ b/spherSomaSwc/NeuroML2/.test.jnmlnrn.omt @@ -0,0 +1,8 @@ +# Script for running automated tests on OSB, see https://github.com/OpenSourceBrain/osb-model-validation + +target: LEMS_pyrfull_out.xml +engine: jNeuroML_NEURON + + + + diff --git a/spherSomaSwc/NeuroML2/.test.validate.omt b/spherSomaSwc/NeuroML2/.test.validate.omt new file mode 100644 index 0000000..c0f9086 --- /dev/null +++ b/spherSomaSwc/NeuroML2/.test.validate.omt @@ -0,0 +1,5 @@ +# Script for running automated tests on OSB, see https://github.com/OpenSourceBrain/osb-model-validation + +# This test will validate all of the NeuroML 2 files in the current directory using: jnml -validate *.nml +target: "*.nml" +engine: jNeuroML_validate