diff --git a/source/Userdocs/Walkthroughs/RayEtAl2020/Conversion.md b/source/Userdocs/Walkthroughs/RayEtAl2020/Conversion.md index 6197c962..aac2007f 100644 --- a/source/Userdocs/Walkthroughs/RayEtAl2020/Conversion.md +++ b/source/Userdocs/Walkthroughs/RayEtAl2020/Conversion.md @@ -213,14 +213,11 @@ These are included in the `mod` folder. An inspection tells us that these are all Hodgkin-Huxley type ion channels that use similar formalisms. The first thing to do is to generate plots of time courses and steady states of the various ion channels. -These can be done easily using `pynml-modchannelanalysis` command line tool included in pyNeuroML. -Note that this tool takes the name of the ion channel as an argument, and this must match the name of the mod file. -So we must rename the mod files to use it. +These can be done easily using `pynml-modchananalysis` command line tool included in pyNeuroML. We begin with the `nas` channel: ```{code-block} -mv nas_wustenberg.mod nas.mod -pynml-modchananalysis nas +pynml-modchananalysis -modFile nas_wustenberg.mod nas ``` This will generate two plots, one for the steady state dynamics (`inf`), and one for the time course (`tau`) for activation variables in the channels: