chore: prepare for 1.1.4

NeuroML · Oct 20, 2023 · aa5a104 · aa5a104
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diff --git a/man/man1/pynml-archive.1 b/man/man1/pynml-archive.1
@@ -1,7 +1,7 @@
 .\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.49.3.
-.TH PYNML-ARCHIVE "1" "September 2023" "pynml-archive v1.1.2" "User Commands"
+.TH PYNML-ARCHIVE "1" "October 2023" "pynml-archive v1.1.4" "User Commands"
 .SH NAME
-pynml-archive \- manual page for pynml-archive v1.1.2
+pynml-archive \- manual page for pynml-archive v1.1.4
 .SH DESCRIPTION
 usage: pynml\-archive [\-h] [\-zipfileName <zip file name>]
 .TP
@@ -29,7 +29,7 @@ Extension to use for archive.
 Explicit list of files to create archive of.
 .SH ENVIRONMENT
 .PP
-pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4)
+pyNeuroML v1.1.4 (libNeuroML v0.5.6, jNeuroML v0.13.0)
 .SH "SEE ALSO"
 .BR pynml (1),
 .BR pynml-channelanalysis (1),

diff --git a/man/man1/pynml-channelanalysis.1 b/man/man1/pynml-channelanalysis.1
@@ -1,7 +1,7 @@
 .\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.49.3.
-.TH PYNML-CHANNELANALYSIS "1" "September 2023" "pynml-channelanalysis v1.1.2" "User Commands"
+.TH PYNML-CHANNELANALYSIS "1" "October 2023" "pynml-channelanalysis v1.1.4" "User Commands"
 .SH NAME
-pynml-channelanalysis \- manual page for pynml-channelanalysis v1.1.2
+pynml-channelanalysis \- manual page for pynml-channelanalysis v1.1.4
 .SH DESCRIPTION
 usage: pynml\-channelanalysis [\-h] [\-v] [\-minV <min v>] [\-maxV <max v>]
 .TP
@@ -94,7 +94,7 @@ Save currents through voltage clamp at each level &
 plot current vs voltage for ion channel
 .SH ENVIRONMENT
 .PP
-pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4)
+pyNeuroML v1.1.4 (libNeuroML v0.5.6, jNeuroML v0.13.0)
 .SH "SEE ALSO"
 .BR pynml (1),
 .BR pynml-channelanalysis (1),

diff --git a/man/man1/pynml-channelml2nml.1 b/man/man1/pynml-channelml2nml.1
@@ -1,7 +1,7 @@
 .\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.49.3.
-.TH PYNML-CHANNELML2NML "1" "September 2023" "pynml-channelml2nml v1.1.2" "User Commands"
+.TH PYNML-CHANNELML2NML "1" "October 2023" "pynml-channelml2nml v1.1.4" "User Commands"
 .SH NAME
-pynml-channelml2nml \- manual page for pynml-channelml2nml v1.1.2
+pynml-channelml2nml \- manual page for pynml-channelml2nml v1.1.4
 .SH DESCRIPTION
 usage: pynml\-channelml2nml [\-h] [\-xsltfile <XSLT file>]
 .TP
@@ -25,7 +25,7 @@ Path to the XSLT file
 Name of the outputfile file
 .SH ENVIRONMENT
 .PP
-pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4)
+pyNeuroML v1.1.4 (libNeuroML v0.5.6, jNeuroML v0.13.0)
 .SH "SEE ALSO"
 .BR pynml (1),
 .BR pynml-channelanalysis (1),

diff --git a/man/man1/pynml-modchananalysis.1 b/man/man1/pynml-modchananalysis.1
@@ -1,7 +1,7 @@
 .\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.49.3.
-.TH PYNML-MODCHANANALYSIS "1" "September 2023" "pynml-modchananalysis v1.1.2" "User Commands"
+.TH PYNML-MODCHANANALYSIS "1" "October 2023" "pynml-modchananalysis v1.1.4" "User Commands"
 .SH NAME
-pynml-modchananalysis \- manual page for pynml-modchananalysis v1.1.2
+pynml-modchananalysis \- manual page for pynml-modchananalysis v1.1.4
 .SH DESCRIPTION
 usage: pynml\-modchananalysis [\-h] [\-v] [\-nogui] [\-minV <min v>]
 .TP
@@ -56,7 +56,7 @@ in mM)
 Name of the mod file containing the channel
 .SH ENVIRONMENT
 .PP
-pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4)
+pyNeuroML v1.1.4 (libNeuroML v0.5.6, jNeuroML v0.13.0)
 .SH "SEE ALSO"
 .BR pynml (1),
 .BR pynml-channelanalysis (1),

diff --git a/man/man1/pynml-plotchan.1 b/man/man1/pynml-plotchan.1
@@ -1,7 +1,7 @@
 .\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.49.3.
-.TH PYNML-PLOTCHAN "1" "September 2023" "pynml-plotchan v1.1.2" "User Commands"
+.TH PYNML-PLOTCHAN "1" "October 2023" "pynml-plotchan v1.1.4" "User Commands"
 .SH NAME
-pynml-plotchan \- manual page for pynml-plotchan v1.1.2
+pynml-plotchan \- manual page for pynml-plotchan v1.1.4
 .SH DESCRIPTION
 usage: pynml\-plotchan [\-h] [\-noDistancePlots] [\-nogui]
 .IP
@@ -25,7 +25,7 @@ Do not generate distance plots
 Do not show plots as they are generated
 .SH ENVIRONMENT
 .PP
-pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4)
+pyNeuroML v1.1.4 (libNeuroML v0.5.6, jNeuroML v0.13.0)
 .SH "SEE ALSO"
 .BR pynml (1),
 .BR pynml-channelanalysis (1),

diff --git a/man/man1/pynml-plotmorph.1 b/man/man1/pynml-plotmorph.1
@@ -1,7 +1,7 @@
 .\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.49.3.
-.TH PYNML-PLOTMORPH "1" "September 2023" "pynml-plotmorph v1.1.2" "User Commands"
+.TH PYNML-PLOTMORPH "1" "October 2023" "pynml-plotmorph v1.1.4" "User Commands"
 .SH NAME
-pynml-plotmorph \- manual page for pynml-plotmorph v1.1.2
+pynml-plotmorph \- manual page for pynml-plotmorph v1.1.4
 .SH DESCRIPTION
 usage: pynml\-plotmorph [\-h] [\-v] [\-nogui] [\-plane2d <plane, e.g. xy, yz, zx>]
 .TP
@@ -55,7 +55,7 @@ Scale axes so that image is approximately square, for
 2D plot
 .SH ENVIRONMENT
 .PP
-pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4)
+pyNeuroML v1.1.4 (libNeuroML v0.5.6, jNeuroML v0.13.0)
 .SH "SEE ALSO"
 .BR pynml (1),
 .BR pynml-channelanalysis (1),

diff --git a/man/man1/pynml-plotspikes.1 b/man/man1/pynml-plotspikes.1
@@ -1,7 +1,7 @@
 .\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.49.3.
-.TH PYNML-PLOTSPIKES "1" "September 2023" "pynml-plotspikes v1.1.2" "User Commands"
+.TH PYNML-PLOTSPIKES "1" "October 2023" "pynml-plotspikes v1.1.4" "User Commands"
 .SH NAME
-pynml-plotspikes \- manual page for pynml-plotspikes v1.1.2
+pynml-plotspikes \- manual page for pynml-plotspikes v1.1.4
 .SH DESCRIPTION
 usage: pynml\-plotspikes [\-h] [\-format <format>] [\-rates] [\-showPlotsAlready]
 .TP
@@ -44,7 +44,7 @@ Window for rate calculation in ms
 Number of bins for rate histogram
 .SH ENVIRONMENT
 .PP
-pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4)
+pyNeuroML v1.1.4 (libNeuroML v0.5.6, jNeuroML v0.13.0)
 .SH "SEE ALSO"
 .BR pynml (1),
 .BR pynml-channelanalysis (1),

diff --git a/man/man1/pynml-povray.1 b/man/man1/pynml-povray.1
@@ -1,7 +1,7 @@
 .\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.49.3.
-.TH PYNML-POVRAY "1" "September 2023" "pynml-povray v1.1.2" "User Commands"
+.TH PYNML-POVRAY "1" "October 2023" "pynml-povray v1.1.4" "User Commands"
 .SH NAME
-pynml-povray \- manual page for pynml-povray v1.1.2
+pynml-povray \- manual page for pynml-povray v1.1.4
 .SH DESCRIPTION
 usage: pynml\-povray [\-h] [\-split] [\-background <background colour>] [\-movie]
 .TP
@@ -96,7 +96,7 @@ cell/network
 Show segment ids
 .SH ENVIRONMENT
 .PP
-pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4)
+pyNeuroML v1.1.4 (libNeuroML v0.5.6, jNeuroML v0.13.0)
 .SH "SEE ALSO"
 .BR pynml (1),
 .BR pynml-channelanalysis (1),

diff --git a/man/man1/pynml-sonata.1 b/man/man1/pynml-sonata.1
@@ -1,7 +1,7 @@
 .\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.49.3.
-.TH PYNML-SONATA "1" "September 2023" "pynml-sonata v1.1.2" "User Commands"
+.TH PYNML-SONATA "1" "October 2023" "pynml-sonata v1.1.4" "User Commands"
 .SH NAME
-pynml-sonata \- manual page for pynml-sonata v1.1.2
+pynml-sonata \- manual page for pynml-sonata v1.1.4
 .SH DESCRIPTION
 usage: pynml\-sonata [\-h] [\-h5] [\-jnml] [\-neuron]
 .IP
@@ -34,7 +34,7 @@ Execute the generated LEMS/NeuroML2 model with
 jNeuroML_NEURON
 .SH ENVIRONMENT
 .PP
-pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4)
+pyNeuroML v1.1.4 (libNeuroML v0.5.6, jNeuroML v0.13.0)
 .SH "SEE ALSO"
 .BR pynml (1),
 .BR pynml-channelanalysis (1),

diff --git a/man/man1/pynml-summary.1 b/man/man1/pynml-summary.1
@@ -1,7 +1,7 @@
 .\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.49.3.
-.TH PYNML-SUMMARY "1" "September 2023" "pynml-summary v1.1.2" "User Commands"
+.TH PYNML-SUMMARY "1" "October 2023" "pynml-summary v1.1.4" "User Commands"
 .SH NAME
-pynml-summary \- manual page for pynml-summary v1.1.2
+pynml-summary \- manual page for pynml-summary v1.1.4
 .SH DESCRIPTION
 Usage:
 .PP
@@ -19,7 +19,7 @@ enable verbose mode
 print this help text and exit
 .SH ENVIRONMENT
 .PP
-pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4)
+pyNeuroML v1.1.4 (libNeuroML v0.5.6, jNeuroML v0.13.0)
 .SH "SEE ALSO"
 .BR pynml (1),
 .BR pynml-channelanalysis (1),

diff --git a/man/man1/pynml-tune.1 b/man/man1/pynml-tune.1
@@ -1,7 +1,7 @@
 .\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.49.3.
-.TH PYNML-TUNE "1" "September 2023" "pynml-tune v1.1.2" "User Commands"
+.TH PYNML-TUNE "1" "October 2023" "pynml-tune v1.1.4" "User Commands"
 .SH NAME
-pynml-tune \- manual page for pynml-tune v1.1.2
+pynml-tune \- manual page for pynml-tune v1.1.4
 .SH DESCRIPTION
 usage: pynml\-tune [\-h] [\-simTime <simTime>] [\-dt <dt>]
 .IP
@@ -132,7 +132,7 @@ Should (some) generated files, e.g. *.dat, be deleted
 as optimisation progresses?
 .SH ENVIRONMENT
 .PP
-pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4)
+pyNeuroML v1.1.4 (libNeuroML v0.5.6, jNeuroML v0.13.0)
 .SH "SEE ALSO"
 .BR pynml (1),
 .BR pynml-channelanalysis (1),

diff --git a/man/man1/pynml.1 b/man/man1/pynml.1
@@ -1,7 +1,7 @@
 .\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.49.3.
-.TH PYNML "1" "September 2023" "pynml v1.1.2" "User Commands"
+.TH PYNML "1" "October 2023" "pynml v1.1.4" "User Commands"
 .SH NAME
-pynml \- manual page for pynml v1.1.2
+pynml \- manual page for pynml v1.1.4
 .SH DESCRIPTION
 usage: pynml [\-h|\-\-help] [<shared options>] <one of the mutually\-exclusive options>
 .PP
@@ -180,7 +180,7 @@ latest Schema
 v1.8.1 Schema
 .SH ENVIRONMENT
 .PP
-pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4)
+pyNeuroML v1.1.4 (libNeuroML v0.5.6, jNeuroML v0.13.0)
 .SH "SEE ALSO"
 .BR pynml (1),
 .BR pynml-channelanalysis (1),

diff --git a/man/man1/version.h2m b/man/man1/version.h2m
@@ -1,3 +1,3 @@
 [environment]
 .PP
-pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4)
+pyNeuroML v1.1.4 (libNeuroML v0.5.6, jNeuroML v0.13.0)
diff --git a/setup.cfg b/setup.cfg
@@ -1,6 +1,6 @@
 [metadata]
 name = pyNeuroML
-version = 1.1.3
+version = 1.1.4
 author = Padraig Gleeson
 author_email = [email protected]
 url = https://github.com/NeuroML/pyNeuroML