From aa5a104b60b8cd765e2d9c0a121b3e80b61054f5 Mon Sep 17 00:00:00 2001 From: "Ankur Sinha (Ankur Sinha Gmail)" Date: Fri, 20 Oct 2023 13:16:02 +0100 Subject: [PATCH] chore: prepare for 1.1.4 --- man/man1/pynml-archive.1 | 6 +++--- man/man1/pynml-channelanalysis.1 | 6 +++--- man/man1/pynml-channelml2nml.1 | 6 +++--- man/man1/pynml-modchananalysis.1 | 6 +++--- man/man1/pynml-plotchan.1 | 6 +++--- man/man1/pynml-plotmorph.1 | 6 +++--- man/man1/pynml-plotspikes.1 | 6 +++--- man/man1/pynml-povray.1 | 6 +++--- man/man1/pynml-sonata.1 | 6 +++--- man/man1/pynml-summary.1 | 6 +++--- man/man1/pynml-tune.1 | 6 +++--- man/man1/pynml.1 | 6 +++--- man/man1/version.h2m | 2 +- setup.cfg | 2 +- 14 files changed, 38 insertions(+), 38 deletions(-) diff --git a/man/man1/pynml-archive.1 b/man/man1/pynml-archive.1 index 979a8812..fa8e0d37 100644 --- a/man/man1/pynml-archive.1 +++ b/man/man1/pynml-archive.1 @@ -1,7 +1,7 @@ .\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3. -.TH PYNML-ARCHIVE "1" "September 2023" "pynml-archive v1.1.2" "User Commands" +.TH PYNML-ARCHIVE "1" "October 2023" "pynml-archive v1.1.4" "User Commands" .SH NAME -pynml-archive \- manual page for pynml-archive v1.1.2 +pynml-archive \- manual page for pynml-archive v1.1.4 .SH DESCRIPTION usage: pynml\-archive [\-h] [\-zipfileName ] .TP @@ -29,7 +29,7 @@ Extension to use for archive. Explicit list of files to create archive of. .SH ENVIRONMENT .PP -pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4) +pyNeuroML v1.1.4 (libNeuroML v0.5.6, jNeuroML v0.13.0) .SH "SEE ALSO" .BR pynml (1), .BR pynml-channelanalysis (1), diff --git a/man/man1/pynml-channelanalysis.1 b/man/man1/pynml-channelanalysis.1 index 98e45fea..0d92e559 100644 --- a/man/man1/pynml-channelanalysis.1 +++ b/man/man1/pynml-channelanalysis.1 @@ -1,7 +1,7 @@ .\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3. -.TH PYNML-CHANNELANALYSIS "1" "September 2023" "pynml-channelanalysis v1.1.2" "User Commands" +.TH PYNML-CHANNELANALYSIS "1" "October 2023" "pynml-channelanalysis v1.1.4" "User Commands" .SH NAME -pynml-channelanalysis \- manual page for pynml-channelanalysis v1.1.2 +pynml-channelanalysis \- manual page for pynml-channelanalysis v1.1.4 .SH DESCRIPTION usage: pynml\-channelanalysis [\-h] [\-v] [\-minV ] [\-maxV ] .TP @@ -94,7 +94,7 @@ Save currents through voltage clamp at each level & plot current vs voltage for ion channel .SH ENVIRONMENT .PP -pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4) +pyNeuroML v1.1.4 (libNeuroML v0.5.6, jNeuroML v0.13.0) .SH "SEE ALSO" .BR pynml (1), .BR pynml-channelanalysis (1), diff --git a/man/man1/pynml-channelml2nml.1 b/man/man1/pynml-channelml2nml.1 index fac0818a..1db181fb 100644 --- a/man/man1/pynml-channelml2nml.1 +++ b/man/man1/pynml-channelml2nml.1 @@ -1,7 +1,7 @@ .\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3. -.TH PYNML-CHANNELML2NML "1" "September 2023" "pynml-channelml2nml v1.1.2" "User Commands" +.TH PYNML-CHANNELML2NML "1" "October 2023" "pynml-channelml2nml v1.1.4" "User Commands" .SH NAME -pynml-channelml2nml \- manual page for pynml-channelml2nml v1.1.2 +pynml-channelml2nml \- manual page for pynml-channelml2nml v1.1.4 .SH DESCRIPTION usage: pynml\-channelml2nml [\-h] [\-xsltfile ] .TP @@ -25,7 +25,7 @@ Path to the XSLT file Name of the outputfile file .SH ENVIRONMENT .PP -pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4) +pyNeuroML v1.1.4 (libNeuroML v0.5.6, jNeuroML v0.13.0) .SH "SEE ALSO" .BR pynml (1), .BR pynml-channelanalysis (1), diff --git a/man/man1/pynml-modchananalysis.1 b/man/man1/pynml-modchananalysis.1 index b59bb5d6..cfeeeb4b 100644 --- a/man/man1/pynml-modchananalysis.1 +++ b/man/man1/pynml-modchananalysis.1 @@ -1,7 +1,7 @@ .\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3. -.TH PYNML-MODCHANANALYSIS "1" "September 2023" "pynml-modchananalysis v1.1.2" "User Commands" +.TH PYNML-MODCHANANALYSIS "1" "October 2023" "pynml-modchananalysis v1.1.4" "User Commands" .SH NAME -pynml-modchananalysis \- manual page for pynml-modchananalysis v1.1.2 +pynml-modchananalysis \- manual page for pynml-modchananalysis v1.1.4 .SH DESCRIPTION usage: pynml\-modchananalysis [\-h] [\-v] [\-nogui] [\-minV ] .TP @@ -56,7 +56,7 @@ in mM) Name of the mod file containing the channel .SH ENVIRONMENT .PP -pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4) +pyNeuroML v1.1.4 (libNeuroML v0.5.6, jNeuroML v0.13.0) .SH "SEE ALSO" .BR pynml (1), .BR pynml-channelanalysis (1), diff --git a/man/man1/pynml-plotchan.1 b/man/man1/pynml-plotchan.1 index f5265b6d..2fec9e3b 100644 --- a/man/man1/pynml-plotchan.1 +++ b/man/man1/pynml-plotchan.1 @@ -1,7 +1,7 @@ .\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3. -.TH PYNML-PLOTCHAN "1" "September 2023" "pynml-plotchan v1.1.2" "User Commands" +.TH PYNML-PLOTCHAN "1" "October 2023" "pynml-plotchan v1.1.4" "User Commands" .SH NAME -pynml-plotchan \- manual page for pynml-plotchan v1.1.2 +pynml-plotchan \- manual page for pynml-plotchan v1.1.4 .SH DESCRIPTION usage: pynml\-plotchan [\-h] [\-noDistancePlots] [\-nogui] .IP @@ -25,7 +25,7 @@ Do not generate distance plots Do not show plots as they are generated .SH ENVIRONMENT .PP -pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4) +pyNeuroML v1.1.4 (libNeuroML v0.5.6, jNeuroML v0.13.0) .SH "SEE ALSO" .BR pynml (1), .BR pynml-channelanalysis (1), diff --git a/man/man1/pynml-plotmorph.1 b/man/man1/pynml-plotmorph.1 index 66822a62..fe37f2d7 100644 --- a/man/man1/pynml-plotmorph.1 +++ b/man/man1/pynml-plotmorph.1 @@ -1,7 +1,7 @@ .\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3. -.TH PYNML-PLOTMORPH "1" "September 2023" "pynml-plotmorph v1.1.2" "User Commands" +.TH PYNML-PLOTMORPH "1" "October 2023" "pynml-plotmorph v1.1.4" "User Commands" .SH NAME -pynml-plotmorph \- manual page for pynml-plotmorph v1.1.2 +pynml-plotmorph \- manual page for pynml-plotmorph v1.1.4 .SH DESCRIPTION usage: pynml\-plotmorph [\-h] [\-v] [\-nogui] [\-plane2d ] .TP @@ -55,7 +55,7 @@ Scale axes so that image is approximately square, for 2D plot .SH ENVIRONMENT .PP -pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4) +pyNeuroML v1.1.4 (libNeuroML v0.5.6, jNeuroML v0.13.0) .SH "SEE ALSO" .BR pynml (1), .BR pynml-channelanalysis (1), diff --git a/man/man1/pynml-plotspikes.1 b/man/man1/pynml-plotspikes.1 index 0a14e3b4..9312ce1b 100644 --- a/man/man1/pynml-plotspikes.1 +++ b/man/man1/pynml-plotspikes.1 @@ -1,7 +1,7 @@ .\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3. -.TH PYNML-PLOTSPIKES "1" "September 2023" "pynml-plotspikes v1.1.2" "User Commands" +.TH PYNML-PLOTSPIKES "1" "October 2023" "pynml-plotspikes v1.1.4" "User Commands" .SH NAME -pynml-plotspikes \- manual page for pynml-plotspikes v1.1.2 +pynml-plotspikes \- manual page for pynml-plotspikes v1.1.4 .SH DESCRIPTION usage: pynml\-plotspikes [\-h] [\-format ] [\-rates] [\-showPlotsAlready] .TP @@ -44,7 +44,7 @@ Window for rate calculation in ms Number of bins for rate histogram .SH ENVIRONMENT .PP -pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4) +pyNeuroML v1.1.4 (libNeuroML v0.5.6, jNeuroML v0.13.0) .SH "SEE ALSO" .BR pynml (1), .BR pynml-channelanalysis (1), diff --git a/man/man1/pynml-povray.1 b/man/man1/pynml-povray.1 index 3de77106..004c0a81 100644 --- a/man/man1/pynml-povray.1 +++ b/man/man1/pynml-povray.1 @@ -1,7 +1,7 @@ .\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3. -.TH PYNML-POVRAY "1" "September 2023" "pynml-povray v1.1.2" "User Commands" +.TH PYNML-POVRAY "1" "October 2023" "pynml-povray v1.1.4" "User Commands" .SH NAME -pynml-povray \- manual page for pynml-povray v1.1.2 +pynml-povray \- manual page for pynml-povray v1.1.4 .SH DESCRIPTION usage: pynml\-povray [\-h] [\-split] [\-background ] [\-movie] .TP @@ -96,7 +96,7 @@ cell/network Show segment ids .SH ENVIRONMENT .PP -pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4) +pyNeuroML v1.1.4 (libNeuroML v0.5.6, jNeuroML v0.13.0) .SH "SEE ALSO" .BR pynml (1), .BR pynml-channelanalysis (1), diff --git a/man/man1/pynml-sonata.1 b/man/man1/pynml-sonata.1 index c74752a9..8039ccf8 100644 --- a/man/man1/pynml-sonata.1 +++ b/man/man1/pynml-sonata.1 @@ -1,7 +1,7 @@ .\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3. -.TH PYNML-SONATA "1" "September 2023" "pynml-sonata v1.1.2" "User Commands" +.TH PYNML-SONATA "1" "October 2023" "pynml-sonata v1.1.4" "User Commands" .SH NAME -pynml-sonata \- manual page for pynml-sonata v1.1.2 +pynml-sonata \- manual page for pynml-sonata v1.1.4 .SH DESCRIPTION usage: pynml\-sonata [\-h] [\-h5] [\-jnml] [\-neuron] .IP @@ -34,7 +34,7 @@ Execute the generated LEMS/NeuroML2 model with jNeuroML_NEURON .SH ENVIRONMENT .PP -pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4) +pyNeuroML v1.1.4 (libNeuroML v0.5.6, jNeuroML v0.13.0) .SH "SEE ALSO" .BR pynml (1), .BR pynml-channelanalysis (1), diff --git a/man/man1/pynml-summary.1 b/man/man1/pynml-summary.1 index 7b1c02b6..b741b61d 100644 --- a/man/man1/pynml-summary.1 +++ b/man/man1/pynml-summary.1 @@ -1,7 +1,7 @@ .\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3. -.TH PYNML-SUMMARY "1" "September 2023" "pynml-summary v1.1.2" "User Commands" +.TH PYNML-SUMMARY "1" "October 2023" "pynml-summary v1.1.4" "User Commands" .SH NAME -pynml-summary \- manual page for pynml-summary v1.1.2 +pynml-summary \- manual page for pynml-summary v1.1.4 .SH DESCRIPTION Usage: .PP @@ -19,7 +19,7 @@ enable verbose mode print this help text and exit .SH ENVIRONMENT .PP -pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4) +pyNeuroML v1.1.4 (libNeuroML v0.5.6, jNeuroML v0.13.0) .SH "SEE ALSO" .BR pynml (1), .BR pynml-channelanalysis (1), diff --git a/man/man1/pynml-tune.1 b/man/man1/pynml-tune.1 index 8c30e618..de471a6b 100644 --- a/man/man1/pynml-tune.1 +++ b/man/man1/pynml-tune.1 @@ -1,7 +1,7 @@ .\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3. -.TH PYNML-TUNE "1" "September 2023" "pynml-tune v1.1.2" "User Commands" +.TH PYNML-TUNE "1" "October 2023" "pynml-tune v1.1.4" "User Commands" .SH NAME -pynml-tune \- manual page for pynml-tune v1.1.2 +pynml-tune \- manual page for pynml-tune v1.1.4 .SH DESCRIPTION usage: pynml\-tune [\-h] [\-simTime ] [\-dt
] .IP @@ -132,7 +132,7 @@ Should (some) generated files, e.g. *.dat, be deleted as optimisation progresses? .SH ENVIRONMENT .PP -pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4) +pyNeuroML v1.1.4 (libNeuroML v0.5.6, jNeuroML v0.13.0) .SH "SEE ALSO" .BR pynml (1), .BR pynml-channelanalysis (1), diff --git a/man/man1/pynml.1 b/man/man1/pynml.1 index 56fe4e12..a0f535af 100644 --- a/man/man1/pynml.1 +++ b/man/man1/pynml.1 @@ -1,7 +1,7 @@ .\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.49.3. -.TH PYNML "1" "September 2023" "pynml v1.1.2" "User Commands" +.TH PYNML "1" "October 2023" "pynml v1.1.4" "User Commands" .SH NAME -pynml \- manual page for pynml v1.1.2 +pynml \- manual page for pynml v1.1.4 .SH DESCRIPTION usage: pynml [\-h|\-\-help] [] .PP @@ -180,7 +180,7 @@ latest Schema v1.8.1 Schema .SH ENVIRONMENT .PP -pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4) +pyNeuroML v1.1.4 (libNeuroML v0.5.6, jNeuroML v0.13.0) .SH "SEE ALSO" .BR pynml (1), .BR pynml-channelanalysis (1), diff --git a/man/man1/version.h2m b/man/man1/version.h2m index 79517ab5..0dc9b92f 100644 --- a/man/man1/version.h2m +++ b/man/man1/version.h2m @@ -1,3 +1,3 @@ [environment] .PP -pyNeuroML v1.1.2 (libNeuroML v0.5.3, jNeuroML v0.12.4) +pyNeuroML v1.1.4 (libNeuroML v0.5.6, jNeuroML v0.13.0) diff --git a/setup.cfg b/setup.cfg index e7925067..18668c93 100644 --- a/setup.cfg +++ b/setup.cfg @@ -1,6 +1,6 @@ [metadata] name = pyNeuroML -version = 1.1.3 +version = 1.1.4 author = Padraig Gleeson author_email = p.gleeson@gmail.com url = https://github.com/NeuroML/pyNeuroML