Makefile

PROJECTNAME = allensdk
DISTDIR = dist
BUILDDIR = build
export RELEASE=dev$(BUILD_NUMBER)
RELEASEDIR = $(PROJECTNAME)-$(VERSION).$(RELEASE)
EGGINFODIR = $(PROJECTNAME).egg-info
DOCDIR = doc
COVDIR = htmlcov

DOC_URL=http://alleninstitute.github.io/AllenSDK
#ZIP_FILENAME=AllenSDK-master.zip
#TGZ_FILENAME=AllenSDK-master.tar.gz
#ZIP_URL=https:\/\/github.com\/AllenInstitute\/AllenSDK\/archive\/master.zip
#TGZ_URL=https:\/\/github.com\/AllenInstitute\/AllenSDK\/archive\/master.tar.gz

build:
	mkdir -p $(DISTDIR)/$(PROJECTNAME) 
	cp -r allensdk setup.py README.md $(DISTDIR)/$(PROJECTNAME)/
	cd $(DISTDIR); tar czvf $(PROJECTNAME).tgz --exclude .git $(PROJECTNAME)

distutils_build: clean
	python setup.py build

setversion:
	sed -i --expression 's/'\''[0-9]\+.[0-9]\+.[0-9]\+'\''/'\''${VERSION}.${RELEASE}'\''/g' allensdk/__init__.py

sdist: distutils_build
	python setup.py sdist

pypi_register:
	python setup.py register --repository https://testpypi.python.org/pypi

pypi_deploy:
	python setup.py sdist upload --repository https://testpypi.python.org/pypi

pytest_lax:
	py.test -s --boxed --cov=allensdk --cov-config coveragerc --cov-report html --junitxml=test-reports/test.xml

pytest: pytest_lax

test: pytest

pytest_pep8:
	find -L . -name "test_*.py" -exec py.test --boxed --pep8 --cov-config coveragerc --cov=allensdk --cov-report html --junitxml=test-reports/test.xml {} \+

pytest_lite:
	find -L . -name "test_*.py" -exec py.test --boxed --assert=reinterp --junitxml=test-reports/test.xml {} \+

pylint:
	pylint --disable=C allensdk > htmlcov/pylint.txt || exit 0
	grep import-error htmlcov/pylint.txt > htmlcov/pylint_imports.txt

flake8:
	flake8 --ignore=E201,E202,E226 --max-line-length=200 --filename 'allensdk/**/*.py' allensdk | grep -v "local variable '_' is assigned to but never used" > htmlcov/flake8.txt
	grep -i "import" htmlcov/flake8.txt > htmlcov/imports.txt || exit 0

EXAMPLES=doc/_static/examples

doc: FORCE
	mkdir -p $(DOCDIR)
	cp -r doc_template/* $(DOCDIR)
	cd $(DOCDIR); sphinx-build -b html . _build/html;

notebooks:
	cd doc_template/examples_root/examples/nb && find . -maxdepth 1 -name '*.ipynb' -exec jupyter-nbconvert --to notebook --execute --ExecutePreprocessor.timeout=1800 {} \;
	cd doc_template/examples_root/examples/nb/summer_workshop_2015 && find . -maxdepth 1 -name '*.ipynb' -exec jupyter-nbconvert --to notebook --execute --ExecutePreprocessor.timeout=1800 {} \;

FORCE:

clean:
	rm -rf $(DISTDIR)
	rm -rf $(BUILDDIR)
	rm -rf $(RELEASEDIR)
	rm -rf $(EGGINFODIR)
	rm -rf $(DOCDIR)
	rm -rf $(COVDIR)