diff --git a/DESCRIPTION b/DESCRIPTION index 00f8ea3..2ff3b30 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -68,5 +68,5 @@ Config/testthat/parallel: true VignetteBuilder: knitr Depends: R (>= 4.1) -URL: https://ohdsi.github.io/CohortConstructor/ +URL: https://ohdsi.github.io/CohortConstructor/, https://github.com/OHDSI/CohortConstructor LazyData: true diff --git a/_pkgdown.yml b/_pkgdown.yml index 196adb7..45f0e0b 100644 --- a/_pkgdown.yml +++ b/_pkgdown.yml @@ -1,6 +1,16 @@ url: https://ohdsi.github.io/CohortConstructor/ template: bootstrap: 5 + light-switch: true + bslib: + primary: "#0054AD" + border-radius: 0.5rem + btn-border-radius: 0.25rem + danger: "#A6081A" + +navbar: + structure: + right: [search, github, lightswitch] reference: - subtitle: Build base cohorts diff --git a/vignettes/a02_cohort_table_requirements.Rmd b/vignettes/a02_cohort_table_requirements.Rmd index 323f737..7a5fa95 100644 --- a/vignettes/a02_cohort_table_requirements.Rmd +++ b/vignettes/a02_cohort_table_requirements.Rmd @@ -45,12 +45,12 @@ Let's start by creating a cohort of acetaminophen users. Individuals will have a ```{r} acetaminophen_codes <- getDrugIngredientCodes(cdm, - name = "acetaminophen", - nameStyle = "{concept_name}") + name = "acetaminophen", + nameStyle = "{concept_name}") cdm$acetaminophen <- conceptCohort(cdm = cdm, - conceptSet = acetaminophen_codes, - exit = "event_end_date", - name = "acetaminophen") + conceptSet = acetaminophen_codes, + exit = "event_end_date", + name = "acetaminophen") ``` At this point we have just created our base cohort without having applied any restrictions.