Update model_implementation.md

OceanBioME · Aug 30, 2023 · ea49268 · ea49268
1 parent 6a1110a
commit ea49268
Showing 1 changed file with 5 additions and 3 deletions.
diff --git a/docs/src/model_implementation.md b/docs/src/model_implementation.md
@@ -243,17 +243,19 @@ grid = RectilinearGrid(topology = (Flat, Flat, Bounded), size = (32, ), extent =
 
 # setup the biogeochemical model
 
-light_attenuation_model = TwoBandPhotosyntheticallyActiveRadiation(; grid, surface_PAR)
+light_attenuation = TwoBandPhotosyntheticallyActiveRadiation(; grid, surface_PAR)
 
-sediment_model = InstantRemineralisation(; grid)
+sediment = InstantRemineralisation(; grid)
 
 sinking_velocity = ZFaceField(grid)
 
 w_sink(x, y, z) = 2 / day * tanh(z / 5)
 
 set!(sinking_velocity, w_sink)
 
-biogeochemistry = NutrientPhytoplankton(; light_attenuation_model, sinking_velocity, sediment_model) 
+biogeochemistry = Biogeochemistry(NutrientPhytoplankton(; light_attenuation_model, sinking_velocity);
+                                  light_attenuation,
+                                  sediment) 
 
 # put the model together