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create_bedfiles ignores gene strand for deletion naming #4

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guillaumecharbonnier opened this issue Jul 9, 2024 · 2 comments
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@guillaumecharbonnier
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For genes on reverse strand, the exons are still numerotated in the forward strand order:

Screenshot from 2024-07-09 18-04-40

@guillaumecharbonnier guillaumecharbonnier changed the title create_bedfiles ignore gene strand for deletion naming create_bedfiles ignores gene strand for deletion naming Jul 9, 2024
@guillaumecharbonnier
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@lonsbio
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lonsbio commented Jul 16, 2024

Thank you for raising this issue. That solution looks good. I am scheduled to do an update to Toblerone soon and will revisit then

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